Gene Tpau_2760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2760 
Symbol 
ID9156925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2858784 
End bp2860097 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content67% 
IMG OID 
Productprotein of unknown function DUF21 
Protein accessionYP_003647697 
Protein GI296140454 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.24757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCTCGT CGATCCTCCT GGTCATCGGC GTCGTCGCAC TGGTCCTGCT GGGAGGCTTG 
TTCGCCGCCG TCGACGCCGC GTTACTCACC GTTTCGCCGG CCCGCGTCGA AGACCTGGTC
GAGGACAACC GACCGGGCGC GAAGCGATTG CAACGGGTCT TGCAGAACCG CCCGCTCTAC
GTGAATCTCG CTGTGCTGCT TCGGACCGCC TGCGAGATCT CGGCCACCGT ACTGATGTTC
ATGGTGCTCG ATCGCTACCT GTCCACCGCG TGGACGGCCG TGATCACCGC CGTCACCATG
ACTGTCGTCA GCTACGTCCT GATCGGCGTG GGGCCGCGCA CCCTCGGCCG CCAGCACGCC
TATTCGCTCG GTTGCGCGGC GGCATTGCCC ATGCAGGTGA TCGCGACACT GATGGGCCCG
ATCACCAGGC TGCTCATCCT GCTCGGTAAC GCCGTCACCC CCGGTCGCGG ATTCCGCAAC
GGCCCGTTCG CGACCGAAGT CGAACTGCGT GAGCTCGTCG ATATGGCGCA GCAGCGCGGA
GTGGTCGATG CGGACGAGGG CAAGATGATC CAGTCGGTCT TCGAACTCGG CGATACCGCC
GCCCGCGAGG TGATGGTGCC ACGCCCCGAG ATCGTGTGGA TCGAATCCGA TAAGACGGTC
TCCCAGGCGA TTCGGCTCGC CGTGCGCTCG GGCCACTCCC GGATACCGGT GATCGGCGAG
AACGTCGACG ATGTGCGGGG CGTGGTCTAC CTCAAAGACC TCGTCGCGCT GCCCGACGGT
GCCGATCGGC ATGCCATCGA GGTGGGCACG ATGGCCCGCG ACGCGGTTTT CGTGCCGGAC
TCGAAGCCGG TGGACGCGCT GCTGCGCGAG ATGCAGTTGA CCAACAACCA CATGGCCGTG
CTGGTCAACG AATACGGTTC CATCGCCGGC CTGGTGACCA TCGAGGACGT GCTGGAGGAG
ATCGTCGGCG AAATCACCGA CGAGTACGAC GCCGACGAGA TCGCTCCCAT CGAGGACCTC
GGCGGCGGCG TGTACCGGGT GTCCGCGCGG CTCGACCTGG AGTCGCTGGG CGAGCTGTAC
GACAAGGACA TCGAGGAGGA CGAGGTCGAC ACGGTCGGTG GCCTGCTCGG ACTCGTGCTC
GGGCGCGTCC CGCTGCCCGG CAGCGAGGCG CAGGCGCACG GCCTGTTGCT GGAGGCCGAG
GGGTCCACGG ATCGTCGTGG GAGGATGCGG ATTACCACCG TCGTGGTGCG CCGCGCCGAC
GACGAAGATG ACGAGGTCGC CTCCGATGAG GCGGACGAGA AGGAGAGCGT GTGA
 
Protein sequence
MSSSILLVIG VVALVLLGGL FAAVDAALLT VSPARVEDLV EDNRPGAKRL QRVLQNRPLY 
VNLAVLLRTA CEISATVLMF MVLDRYLSTA WTAVITAVTM TVVSYVLIGV GPRTLGRQHA
YSLGCAAALP MQVIATLMGP ITRLLILLGN AVTPGRGFRN GPFATEVELR ELVDMAQQRG
VVDADEGKMI QSVFELGDTA AREVMVPRPE IVWIESDKTV SQAIRLAVRS GHSRIPVIGE
NVDDVRGVVY LKDLVALPDG ADRHAIEVGT MARDAVFVPD SKPVDALLRE MQLTNNHMAV
LVNEYGSIAG LVTIEDVLEE IVGEITDEYD ADEIAPIEDL GGGVYRVSAR LDLESLGELY
DKDIEEDEVD TVGGLLGLVL GRVPLPGSEA QAHGLLLEAE GSTDRRGRMR ITTVVVRRAD
DEDDEVASDE ADEKESV