Gene Tpau_2709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2709 
Symbol 
ID9156870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2814432 
End bp2815181 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content69% 
IMG OID 
ProductProtein of unknown function DUF2068, transmembrane 
Protein accessionYP_003647646 
Protein GI296140403 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.122601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTCT CCGTGCTGTG GTGTGGCGTG CGCGGCCACG TCACCTACGC GCCCGACGAG 
GGCGACCTCC GTGGGCGCAT CCACGCCGAG ACACCGGAGG GGTCGGCGTG GCGGTGCCTG
CGGTGCGACG ACTACGTGGT CGGTGAGCCG GTCGGTTCCG GCCCCGCCGC GGAGGCGCCG
ACGGTTCCGC GCGGTCGTGC GCTTCGTGAC GAGCTGATCA TGCGATTCCT CGCCGTCGAA
CGGTTTCTGC GCGGCCTCGT GTTCGTCGCC GCGGGCTTCG CCGTGTGGAA GGTCCGCGAT
TCCCGCGGTC ATCTCCGGGA GATCTTCGAC TCCGAGCTCC CCGTGCTGCG CGCGTTGGGC
GAGCAACTCG GTTGGAATCC GGACGACTCC CGCATCATCC GGGCGCTCGA CCAGGCGCTC
GACCTGTCCG GGACCACTCT GCTCTGGGTG GCCGCGGGGC TTTTCGCGTA CGCGGTGATC
GAGTTCGTCG AGGCCGTGGG GCTCTGGCGC GGCGCACGGT GGGGCGAGTA CTTCGCGGTG
ATCGCCACCT CGGCGTTCCT GCCGCTGGAA ATCTACGAGA TCAGCGAGAA GGTCACCGTG
CTGCGTGCCG GTGCACTGCT GGTCAACATC GCCGCCGTCG CGTGGCTGCT CTGGAGCAAA
CGGCTGTTCG GGCTCAACGG GGGAGCCGAG GCCTACTACG CCGAACGGCA ATCGGAGAGC
GTCCTGACGG TGCGGCGCGC GGGTCAGTAG
 
Protein sequence
MNLSVLWCGV RGHVTYAPDE GDLRGRIHAE TPEGSAWRCL RCDDYVVGEP VGSGPAAEAP 
TVPRGRALRD ELIMRFLAVE RFLRGLVFVA AGFAVWKVRD SRGHLREIFD SELPVLRALG
EQLGWNPDDS RIIRALDQAL DLSGTTLLWV AAGLFAYAVI EFVEAVGLWR GARWGEYFAV
IATSAFLPLE IYEISEKVTV LRAGALLVNI AAVAWLLWSK RLFGLNGGAE AYYAERQSES
VLTVRRAGQ