Gene Tpau_2617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2617 
Symbol 
ID9156778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp2714964 
End bp2715584 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content73% 
IMG OID 
ProductShikimate kinase 
Protein accessionYP_003647559 
Protein GI296140316 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCCCG CGCCCCAGCG AGCGCCGCAG GGGCCGGCCG CGATCCTGAT CGGTCCGCCC 
GGCGCGGGCA AGACGACCAT CGGCCGGCGC CTGGCCAAGG TGCTGCGCGT GGACTTCCTC 
GATATCGATG AGGAGATCGA GCGCCGCGAA GGTCGCACTA TCCCGCAGAT CTTCGCGGGC 
GACGGCGAGC CGGCCTTCCG CGCCATCGAG GAGGCCGTGG TGGCCGATGT GGTCGCCACC 
CACCCCGGTG TCGTCTCGCT GGGCGGTGGT GCGGTGTTGT CCGAGACCAC CCGCGAGCTG 
CTCCGCCGGC ACCAGGTGGT GTACCTCGAA CTCACCGCGG AAGAGGGGAT CCGCCGCACC 
GTCAGCCCGA CCGCGTCTGC GCGGCCGCTG CTCAAGGGCG ACGATCCCGC TGCGGCGTAC 
CGCGCGCTCA TGGCCCGGCG CACGCCGATC TATCGCGAGC TGGCCACCAT CCGGGTCTCC 
ACCGTCGGGC GGGCGCCCGG ATCGGTGGTC CGCCAGGTGC AGCGTCGCCT CAAAGACACC 
GCGCCCGGCC GGGTGCGCCG CGGTCCCTGG CCGCTCCTGC CCGCCGTGCT GCGCACGTCC 
ACCAAGAATC GATCGGAGTA A
 
Protein sequence
MGPAPQRAPQ GPAAILIGPP GAGKTTIGRR LAKVLRVDFL DIDEEIERRE GRTIPQIFAG 
DGEPAFRAIE EAVVADVVAT HPGVVSLGGG AVLSETTREL LRRHQVVYLE LTAEEGIRRT 
VSPTASARPL LKGDDPAAAY RALMARRTPI YRELATIRVS TVGRAPGSVV RQVQRRLKDT 
APGRVRRGPW PLLPAVLRTS TKNRSE