Gene Tpau_2538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2538 
Symbol 
ID9156699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2631111 
End bp2631893 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID 
Producttriosephosphate isomerase 
Protein accessionYP_003647480 
Protein GI296140237 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00272657 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGCA AGCCGCTGAT CGCCGGCAAC TGGAAGATGA ACCTCAATCA CCTCGAAGCG 
ATCGCGGTGG TTCAGAAGCT CGCTTTCGCG TTGCCGGAGA AGTACTTCGC CAAAGTCGAT
GTGACGGTGA TTCCGCCGTT CACCGATCTT CGCTCGGTGC AGACCGCGGT CGACGGAGAC
GGTCTGCTCA TCACCTACGG TGCGCAGGAT CTGTCTCCGC ACGACTCCGG CGCGTACACC
GGCGATATCT CCGGGGCCTT CCTGGCGAAG CTCGGCTGCA CCTATGTGGT CGTCGGACAC
AGCGAGCGCC GCACCATCCA CGGTGAGACC AACGAGATCG TGCTCGAGAA GACGAAGGCC
GCACTGCGTC ACGGCCTGAC TCCGATCGTG TGCATCGGCG AGGGCCTCGA CATCCGTGAG
CAGGGCACGC ATGTGGAGTA CAACATCGAG CAGCTCAAGG GTTCGCTCGC CGGCCTCACC
GCCGACGAGG TGTCGAAGAT CGTGATCGCC TACGAGCCGG TCTGGGCAAT CGGGACCGGT
AAGGTCGCGA CCCCCGCCGA CGCCCAGGAG GTGTGCGCCG CAGTGCGTGC CACCATCGCG
GAGATCGCGT CGGCAGAGGT GGCCGCGGGG ATCCGCGTCC TGTACGGCGG CTCCGTGAGC
AGTAAGAACG TCGGAGAGCT CGTCGCTCAG CCCGATGTGG ACGGCGGCCT GGTCGGCGGT
GCCTCGCTCA AGCCCGACGA GTTCGCGGCG CTCAGCGCGA TCGCCGCCGG CGGACCGCTC
TGA
 
Protein sequence
MSRKPLIAGN WKMNLNHLEA IAVVQKLAFA LPEKYFAKVD VTVIPPFTDL RSVQTAVDGD 
GLLITYGAQD LSPHDSGAYT GDISGAFLAK LGCTYVVVGH SERRTIHGET NEIVLEKTKA
ALRHGLTPIV CIGEGLDIRE QGTHVEYNIE QLKGSLAGLT ADEVSKIVIA YEPVWAIGTG
KVATPADAQE VCAAVRATIA EIASAEVAAG IRVLYGGSVS SKNVGELVAQ PDVDGGLVGG
ASLKPDEFAA LSAIAAGGPL