| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2531 |
|---|
| Symbol | |
|---|
| ID | 9156692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 2622243 |
|---|
| End bp | 2624069 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003647474 |
|---|
| Protein GI | 296140231 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.41472 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTACACCC GCGAGGCATA CATCCACAAC AGCGGACCGA TCAAGGATCT TTATGTCAAG
TTTGAGGTCG ACGAGAACGA CCGGCCTATC CCGACCTTGT TTGTAGGACG CAACGGCGCA
GGCAAGACGA ACCTTCTCTC AACGTTGGCC GAGCCTCTAT TACTAGGTGC GAGCAAAGTT
TACGACGACG TACTTACCCT AAAAGGGTTT GGACGAAGCT ACTTCCGCAT TCTAGGTGCT
AGCACAGTTA CCACCGGCGC CAGCAACGGG TTTGCGATAG TCAAGTACAC AAACGGAGCC
GAATCTGTCT TCTACCGGGA GAATGCCGGA GATATTTCTG TCGACGATGC TAAATCACTA
ATTCCGGACA CGCTCCTCGA AGGCGCAAAC TGGGACGCCA AAGAATCCTC AAAAGAGATC
ATCCTCAACG ATGAGGCGGC GCGGCAGGTG TTCGGGAACG GCGCCTACAT ATTTTTCCCA
TCAAACAGGT CAGAGACTCC GTACTGGTTC AACACCGAGG CGATTCCCGA TCAAAAATTT
GATACCTCGG ATCGATTTAG AAACAATCTC AATAACCCTA TGTACGTTGA GCGAAGCCTC
GACGAGTTCG CGCAATGGCT ATTGGGCGTC CTCGCAGAAT CGCGACTCCC GGTGCTCGAA
GCGGCATACC TAGCGAAATC CGAAGAAAGC AAAGTTGTGG TGACGTGCGA CACAACGCAG
TTCATGGTCG GTCAGACGCC ACTCATTCAA GCCAACAACA TACTTAAGGC TATCACCAGA
TCAAGCGATG CCGCCTTCTA TTGGTCCAGC CGCCACGCCA GTTCCAAGGT TGGAATTCAC
AAGGGCGGCG TCAACCTATG GTCGGGCCTT AAGAGCCTGT CAGCGGGCGA AGGCACCCTC
CTATCCGTGT TCGGCTCACT ACTTCGTCGC AGCGACCAGC TCAGGATAAC TCCCGAGGAA
TTGACCGGAG TCGCCATCAT CGACGAACTG GACGCGCATA TCCATATCGA ACTTCAAATG
AGCGCACTTC CTGAGCTAAT CGCCATGTTC CCACGTATCC AATTCATTAT TTCCAGCCAC
TCGCCGTTCT TCGCATTGGG CATGGAGTCC AAGTTTCCAG GCAAGATCAA TATCGTCGAC
CTACCTTCGG GTCAGAACAT CAACGCGGAA TCATACACAG AATTCAAGGC CGCGCTTGAG
ACTTTTTACG ACACTCGTAG GTTTGAGGAA ATCGTAGACC AAAGACTCCG GGAATCGAAT
ACGCCAACAA TCTTGGTCGG GGGCACTACT GACCGAGACT ACTTTAAAGC AGCTTCTATT
GCCCTTGGTT ACGATGATCT GGCCGACCTA TTTGAGTGGG TTGGGGAACC TGGAGGATCA
GGCGGTGGCC GAAACACAGG CGACTCAAGC CTGCAGAAGG CTGAATCATT CATCCGAGCC
AACCCTTCAC TCGTCTCCAA GGATGTCGTA ATTCTATACG ATTGCGACGC CAAGGCCACG
TCCAGTAGCT CCGGCAAGCT ACACATCGTG CCGATAGAAC AAATACCCGG TGCTCGCTGC
AGCAAAGGCG TAGAGAACCT GCTACCCGAC TCAGTCTTCA CCGAGGACGC GTATGCCATC
CAAGAGAAGC CGGACAGCTA CGGTGGCGGA GCGACGGTCA AATCGATCAA GAAGACCTAT
CTATGCGAGC AGGTCTGTGC CCAACCGAAG AAATCAGCAG AAATTTTTGA GAACTTCAGG
CCGACTTTGG ACGCCATATC GTCACTTCTC GGCACGACGA GGCCCCAATC CGATTCCCAA
ACTACCCCCA CCCCCGCAGC GGAGTGA
|
|---|
| Protein sequence | MYTREAYIHN SGPIKDLYVK FEVDENDRPI PTLFVGRNGA GKTNLLSTLA EPLLLGASKV
YDDVLTLKGF GRSYFRILGA STVTTGASNG FAIVKYTNGA ESVFYRENAG DISVDDAKSL
IPDTLLEGAN WDAKESSKEI ILNDEAARQV FGNGAYIFFP SNRSETPYWF NTEAIPDQKF
DTSDRFRNNL NNPMYVERSL DEFAQWLLGV LAESRLPVLE AAYLAKSEES KVVVTCDTTQ
FMVGQTPLIQ ANNILKAITR SSDAAFYWSS RHASSKVGIH KGGVNLWSGL KSLSAGEGTL
LSVFGSLLRR SDQLRITPEE LTGVAIIDEL DAHIHIELQM SALPELIAMF PRIQFIISSH
SPFFALGMES KFPGKINIVD LPSGQNINAE SYTEFKAALE TFYDTRRFEE IVDQRLRESN
TPTILVGGTT DRDYFKAASI ALGYDDLADL FEWVGEPGGS GGGRNTGDSS LQKAESFIRA
NPSLVSKDVV ILYDCDAKAT SSSSGKLHIV PIEQIPGARC SKGVENLLPD SVFTEDAYAI
QEKPDSYGGG ATVKSIKKTY LCEQVCAQPK KSAEIFENFR PTLDAISSLL GTTRPQSDSQ
TTPTPAAE
|
|---|
| |