Gene Tpau_2497 details

Gene Information

• Locus tag: Tpau_2497
• ID: 9156658
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 2591135
• End bp: 2591707
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 71%
• Product: Curculin domain protein (mannose-binding) lectin
• Protein accession: YP_003647440
• Protein GI: 296140197

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGACG TGCTTCGCGC AGGTAACCAG CTTGGCCTCG GGGAGACCCT CGACTCCCTC 
AACGGCGCCT ACACGCTGAC CCTGCAGAGC GACGGCAACC TCGTGCTGAC CGAGGGCGCC 
GGCTCCGTCG TGTGGGCCAG CGCCACCGAC GGCAAGGGTG TCGAGCGCGC CACCTTCCAG 
ACCGACGGCA ACTTCGTCCT CTACAACGGT GCCGGCGAGG GCGTCTGGTC CACGCAGACC 
GACGGCTCGG GTGCTGATCG CATCGTTCTG CAGGACGACC GCAATCTCGT GGTGTACGCG 
GGCGACGCCG ACAAGTGGGC CTCCAACACC GCCACCGACG CACCCGCCCC GGCCCGTGAG 
GCCGCCCCGG AGCCCGAGCC CGTCGCCGCT GAGGCGCCGG CGGCGCCCCC GGCTCCCGCT 
CCGCGCACCC ACACCGTCGC CTCGGGCGAC ACCCTGTGGG CCATCGCCGA GCAGTACCTG 
GGCGACGGCA ACCGCTACAC CGAGATCGCG CAGCTCAACA ACATCGCGAA CCCGGACCTG 
ATCAACGTGG GCCAGGTCAT CACCATCCCC TGA 

 

Protein sequence

MTDVLRAGNQ LGLGETLDSL NGAYTLTLQS DGNLVLTEGA GSVVWASATD GKGVERATFQ 
TDGNFVLYNG AGEGVWSTQT DGSGADRIVL QDDRNLVVYA GDADKWASNT ATDAPAPARE 
AAPEPEPVAA EAPAAPPAPA PRTHTVASGD TLWAIAEQYL GDGNRYTEIA QLNNIANPDL 
INVGQVITIP