Gene Tpau_2486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2486 
Symbol 
ID9156647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp2578748 
End bp2579470 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content65% 
IMG OID 
ProductRhomboid family protein 
Protein accessionYP_003647429 
Protein GI296140186 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.19288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCACCG TTTCGACCAG CCGCAGCTGG CAGCCCGTGC TGACCTATTC GCTGATCGCC 
GTCAACGTGA TCGCCTTCGC GTTCAGCGCG AAGGCCTCCG GCAGCATTCA GTACAACATG 
TCGGCCCCGG AGGTGAAAGA GTTGGCGCTC TCCGAGGTGG CCACCGCCAA CGGGTGGTGG 
TGGACCGCCA TCACCTCGGG ATTCCTGCAC TTCGGTCCCA TTCACCTGCT GGTGAACATG 
TACTCGCTGT ATGTGCTGGG CCGCAATGTC GAGCAGGTGA TGGATCGGGC GCACTACGGG 
GCGATCTACG CGATCTCGCT GCTCGGTGGT AGTGCTTCGG TGCTGTGGTT CGGCCTGGAG 
AACACCATCA CGGTGGGTGC GTCGGGCGCG ATCTTCGGCC TGATGGGCGC GGAACTGGTG 
CTGCTCTTGC GGATGAAGAT GAACCCCACG TCGCTGGTGG TGGTGATCGG TGCGAACGTG 
ATCGCATCGA TGATGATCCC GGGCATCTCG CTCATGGGCC ACCTGGGCGG TCTCGTCGCG 
GGTGCGGCGG TCGCCGCCGC GATGGTCTAC GTGCCCGAGC TGTTGCCACG GGACAAGCGC 
ACCGCCAAGC AGATCCAGGC CGTCGGCTGG GCGTGCACCG GCGTGATCGC CGCGGTCGTG 
GTGGCGCTCA TCGCGGTACG GTTCGGCACC TACCCGGCGG TGAACCGTTT CGTGATCGGC 
TGA
 
Protein sequence
MTTVSTSRSW QPVLTYSLIA VNVIAFAFSA KASGSIQYNM SAPEVKELAL SEVATANGWW 
WTAITSGFLH FGPIHLLVNM YSLYVLGRNV EQVMDRAHYG AIYAISLLGG SASVLWFGLE 
NTITVGASGA IFGLMGAELV LLLRMKMNPT SLVVVIGANV IASMMIPGIS LMGHLGGLVA 
GAAVAAAMVY VPELLPRDKR TAKQIQAVGW ACTGVIAAVV VALIAVRFGT YPAVNRFVIG