| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2422 |
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| Symbol | |
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| ID | 9156582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 2516303 |
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| End bp | 2519161 |
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| Gene Length | 2859 bp |
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| Protein Length | 952 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_003647367 |
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| Protein GI | 296140124 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGGATC GCCTGATCGT GCGCGGGGCG CGCGAACACA ACCTGCGGGG AATCGATGTG
GATCTCCCGC GCGACAGCCT CATCGTCTTC ACCGGGCTGT CGGGTTCCGG CAAGTCCAGC
CTCGCCTTCG ACACCATCTT CGCGGAGGGA CAGCGGCGCT ACGTCGAATC GCTGTCGGCG
TACGCCCGCC AGTTCCTCGG CCAGATGGAC AAGCCCGATG TCGATTTCAT CGAGGGCCTC
TCGCCCGCGG TGTCGATCGA CCAGAAGTCG ACCAACCGCA ACCCGCGGTC CACCGTGGGC
ACCATCACCG AGGTCTACGA CTACCTGCGC CTGCTGTACG CCCGCGCAGG CACCCCGCAC
TGCCCCGAAT GCGGCTCGGT GATCGCGCGG CAGACGCCGC AGCAGATCGT CGATCAGGTG
CTCGACATGG AACAGGGCAC TCGGTTCCAG GTGCTTGCGC CGGTGGTGCG CACCCGCAAG
GGCGAGTTCG TCGACTTGTT CAATCAGTTG CAGACCCAGG GCTACGCCCG CGCCCGGATC
GACGGGGTGG TCTACCAGCT CAGTGAGCCG CCGAAGCTCA AGAAGCAGGA GAAACACGAC
ATCGAGGTGG TCGTCGACCG GCTCGCCGTG AAGGCCTCGT CGAAGCAGCG GCTCACCGAC
TCCATCGAGA CCGCCCTGCG GCTGGCCGAC GGTATCGTCG TGCTCGATTT CGTGGACCGC
GAGGAGAACG ACCCCGAGCG TGAACGCCGG TTCTCCGAGA AGATGGCCTG CCCCAACGGG
CACCCCATTG CGGTCGACGA TCTGGAACCC CGTTCGTTCT CGTTCAATTC ACCGTACGGT
GCCTGCCCCG AGTGCGACGG CCTCGGCGTC CGCAAGGAGG TCGACCCGGA CCTCGTCGTA
CCCGATCCCG AGTTGTCGCT CGCCGAGGGC GCCATAGCCC CCTGGGCATC CGGCCAGACC
GCCGACTACT TCCTGCGGCT GCTTTCCGGT CTCGCGGACG CGATGGGCTT CGACCTGGAC
ACCCCGTGGA AGAGCCTGCC GGCCAAGGCC CGCAAGGCGG TGATCGAGGG CTCCGAACAC
CAGGTGCACG TCAAGTACAA GAACCGGTAC GGCCGTACCC GCTCGTACTA CGCCGAATTC
GAGGGCGTGA TGCCCTTCCT GCACCGCCGG CTCGAATCCA CCGAGTCCGA GCAGATGAAG
GAGCGGTACG AGGGCTACAT GCGCGACGTA CCGTGCCCCG TCTGTCAGGG CGCTCGGCTG
CGTCCCGAGA TCCTCGCGGT CACCCTCGAC CACCCGCGAT TCGGCGAGAA GTCCATCGCC
GATGTGGCCG CGATGTCGGT GGGCGAGTGC TCCGACTACC TGTCCGATCT CAAGCTCGGC
GCCCGGGAGG CCGCGATCGC CGGCCGCGTC CTCAAAGAGG TGCAGGCCCG GATCGACTTC
CTGCTGGACG TGGGCCTGGA ATACCTGTCG CTCTCGCGGG CTGCCGGCTC TCTCTCGGGC
GGTGAGGCGC AGCGCATCCG GCTCGCCACC CAGATCGGCT CCGGTCTCGC GGGCGTGCTG
TACGTGCTCG ACGAGCCGTC CATCGGCCTG CATCAGCGCG ACAATCGCCG CCTCATCGAC
ACCCTGGTGC GGTTGCGCGA CCTGGGCAAC ACGCTGATCG TGGTCGAACA CGACGAAGAC
ACCATCCGTA CCGCCGACTG GGTGGTCGAC ATCGGCCCGT ACGCGGGTGA GCACGGTGGC
AAGGTGGTGC ACAGTGGCAC CTACAAGGCG CTGCTGAAGA ACAAGGAGTC GCTGACAGGC
GCCTATCTGT CCGGACGCAG GGCACTCCCG GTGCCCGCGG TGCGTCGGCC GATCGATAAG
AAGCGCCAGC TCAAGGTGGT CGGCGCCCGC GAGCACAACC TGCAGGGGAT CGACGTTTCG
TTCCCGCTGG GCGTGCTCAC CGCGGTCACG GGCGTCTCCG GCTCGGGCAA GTCGACCCTG
GTCAACGACA TCCTGGCCAC TGTGCTGGCC AACAAGCTCA ACGGTGCACG GCAGGTACCG
GGACGGCACA GCCGGGTCAC CGGCCTGGAC GATCTGGACA AGTTGGTCCA GGTGGATCAG
TCGCCGATCG GCCGCACGCC CCGGTCGAAC CCGGCCACCT ACACCGGCGT CTTCGACAAG
ATCCGCACGC TGTTCGCCGC TACCACCGAA GCCAAGGTGC GTGGTTATCA GCCGGGCCGG
TTCTCGTTCA ACGTCAAGGG CGGGCGGTGC GAGGCCTGCT CGGGCGACGG CACGATCAAG
ATCGAGATGA ACTTCCTGCC GGACGTGTAC GTGCCGTGCG AGGTGTGTCA CGGCGCCCGG
TACAACCGCG AGACGCTGGA GGTGCATTAC AAGGGCAAGA ACATCGCCGA GGTACTCGAT
ATGCCGATCG AGGAGGCCGC CGACTTCTTC GAGGCGGTCA CCTCGATCCA CCGCTACCTC
AAGACACTGG TGGAAGTGGG TCTCGGTTAC GTGCGGCTCG GACAGCCGGC CACCACGCTC
TCGGGTGGCG AGGCGCAGCG CGTGAAGCTG GCCGCTGAGT TGCAGAAGCG GTCGAACGGG
CGCACCGTGT ACATCCTCGA CGAGCCCACC ACGGGCCTGC ACTTCGAGGA CATCGCGAAG
TTGCTTCAGG TGATCGACGG GCTGGTGGAC AAGGGCAACT CGGTCATCGT GATCGAGCAC
AACCTGGACG TGATCAAGAC CGCCGACTGG ATCGTGGACA TGGGGCCGGA AGGTGGCAGC
GGGGGAGGCA CCGTGGTCGC GCAGGGGACA CCGGAGGATG TGGCCGCGGT GCCCGAGTCG
TACACAGGGA AGTTTCTCGC GGAGGTTCTG GCCACGTAG
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| Protein sequence | MADRLIVRGA REHNLRGIDV DLPRDSLIVF TGLSGSGKSS LAFDTIFAEG QRRYVESLSA
YARQFLGQMD KPDVDFIEGL SPAVSIDQKS TNRNPRSTVG TITEVYDYLR LLYARAGTPH
CPECGSVIAR QTPQQIVDQV LDMEQGTRFQ VLAPVVRTRK GEFVDLFNQL QTQGYARARI
DGVVYQLSEP PKLKKQEKHD IEVVVDRLAV KASSKQRLTD SIETALRLAD GIVVLDFVDR
EENDPERERR FSEKMACPNG HPIAVDDLEP RSFSFNSPYG ACPECDGLGV RKEVDPDLVV
PDPELSLAEG AIAPWASGQT ADYFLRLLSG LADAMGFDLD TPWKSLPAKA RKAVIEGSEH
QVHVKYKNRY GRTRSYYAEF EGVMPFLHRR LESTESEQMK ERYEGYMRDV PCPVCQGARL
RPEILAVTLD HPRFGEKSIA DVAAMSVGEC SDYLSDLKLG AREAAIAGRV LKEVQARIDF
LLDVGLEYLS LSRAAGSLSG GEAQRIRLAT QIGSGLAGVL YVLDEPSIGL HQRDNRRLID
TLVRLRDLGN TLIVVEHDED TIRTADWVVD IGPYAGEHGG KVVHSGTYKA LLKNKESLTG
AYLSGRRALP VPAVRRPIDK KRQLKVVGAR EHNLQGIDVS FPLGVLTAVT GVSGSGKSTL
VNDILATVLA NKLNGARQVP GRHSRVTGLD DLDKLVQVDQ SPIGRTPRSN PATYTGVFDK
IRTLFAATTE AKVRGYQPGR FSFNVKGGRC EACSGDGTIK IEMNFLPDVY VPCEVCHGAR
YNRETLEVHY KGKNIAEVLD MPIEEAADFF EAVTSIHRYL KTLVEVGLGY VRLGQPATTL
SGGEAQRVKL AAELQKRSNG RTVYILDEPT TGLHFEDIAK LLQVIDGLVD KGNSVIVIEH
NLDVIKTADW IVDMGPEGGS GGGTVVAQGT PEDVAAVPES YTGKFLAEVL AT
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