Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2371 |
Symbol | |
ID | 9156528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 2463217 |
End bp | 2464176 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | pseudouridine synthase |
Protein accession | YP_003647316 |
Protein GI | 296140073 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.588015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGAC CCGCTCGCCG TGATGGCACA CCGGACCGAT CCACCCCGAA CAACAAACGC AAGGCGGCGC CCCGTCAGGG CCCGCGCCGC AGCCCCTCGG AGGCGCCTCC GCGGAACAAC ACGCCGCGCC TATCGAACGC GAAACCCGCA CGCACGCAGA ATGTTCCCGT GCGAGATCCC GGCGACCGCG CACCGTCGAA TCCGGGCGGC AGCGCCCTGC CGGATGGCGA GAAGATCCGC CTGCAGAAGG TCCTCGCCCA GGCCGGCGTC GCCTCGCGCC GGGTGGCGGA GGAGATGATC GCCGACGGCC GCGTCGAAGT CGACGGCGAA ATCGTCACCG AACAGGGACT GCGGGTCGAC CCGTCGGTCG CCGTGGTGCG GGTCGACGGC GTGCGCGTGG TGGTCAACGA GAACCTGGTG CACCTCGCAC TGAACAAGCC GCGCGGCTGG CATTCGACGA TGAGCGACGA TATGGGCCGC CCCTGTGTGG GCGATATCGT GGCCGAACGC GTCGCCGCCG GTCAGCGTCT GTTCCATGTG GGCCGGCTCG ACGCCGACAC CGAGGGCCTG CTGCTGGTCA CCAACGACGG CGAGCTGGCG CACCGCCTGA TGCACCCCTC GTACGAGGTT CCCAAGACCT ACCTGGCATG GGTCGCCGGA GAGGTGCCCC GCAACCTGGG CAAGAAACTG CGCGACGGTG TCGAGCTGGA GGACGGCCCG GTCACGGTGG ACCGGTTCTC GGTGCTCGAA GCGGCGGAGG GCAAGTCGAC GGTGCGGGTG GTCCTCCACG AGGGCCGCAA GCACATCGTG CGCCGTCTCC TGGCGGAGGT CGGGCATCCG GTGCAGCGGC TGGTCCGCAC ACATGTGGGC ACCGTCGCCC TCGGCGACCA GCGGCCGGGG TCGCTGCGGG TGCTCGGGCG CGACGAGGTC GAGTCGCTGT ACAAGGCGGT GGGAATGTGA
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Protein sequence | MNRPARRDGT PDRSTPNNKR KAAPRQGPRR SPSEAPPRNN TPRLSNAKPA RTQNVPVRDP GDRAPSNPGG SALPDGEKIR LQKVLAQAGV ASRRVAEEMI ADGRVEVDGE IVTEQGLRVD PSVAVVRVDG VRVVVNENLV HLALNKPRGW HSTMSDDMGR PCVGDIVAER VAAGQRLFHV GRLDADTEGL LLVTNDGELA HRLMHPSYEV PKTYLAWVAG EVPRNLGKKL RDGVELEDGP VTVDRFSVLE AAEGKSTVRV VLHEGRKHIV RRLLAEVGHP VQRLVRTHVG TVALGDQRPG SLRVLGRDEV ESLYKAVGM
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