Gene Tpau_2371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2371 
Symbol 
ID9156528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2463217 
End bp2464176 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content70% 
IMG OID 
Productpseudouridine synthase 
Protein accessionYP_003647316 
Protein GI296140073 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.588015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGAC CCGCTCGCCG TGATGGCACA CCGGACCGAT CCACCCCGAA CAACAAACGC 
AAGGCGGCGC CCCGTCAGGG CCCGCGCCGC AGCCCCTCGG AGGCGCCTCC GCGGAACAAC
ACGCCGCGCC TATCGAACGC GAAACCCGCA CGCACGCAGA ATGTTCCCGT GCGAGATCCC
GGCGACCGCG CACCGTCGAA TCCGGGCGGC AGCGCCCTGC CGGATGGCGA GAAGATCCGC
CTGCAGAAGG TCCTCGCCCA GGCCGGCGTC GCCTCGCGCC GGGTGGCGGA GGAGATGATC
GCCGACGGCC GCGTCGAAGT CGACGGCGAA ATCGTCACCG AACAGGGACT GCGGGTCGAC
CCGTCGGTCG CCGTGGTGCG GGTCGACGGC GTGCGCGTGG TGGTCAACGA GAACCTGGTG
CACCTCGCAC TGAACAAGCC GCGCGGCTGG CATTCGACGA TGAGCGACGA TATGGGCCGC
CCCTGTGTGG GCGATATCGT GGCCGAACGC GTCGCCGCCG GTCAGCGTCT GTTCCATGTG
GGCCGGCTCG ACGCCGACAC CGAGGGCCTG CTGCTGGTCA CCAACGACGG CGAGCTGGCG
CACCGCCTGA TGCACCCCTC GTACGAGGTT CCCAAGACCT ACCTGGCATG GGTCGCCGGA
GAGGTGCCCC GCAACCTGGG CAAGAAACTG CGCGACGGTG TCGAGCTGGA GGACGGCCCG
GTCACGGTGG ACCGGTTCTC GGTGCTCGAA GCGGCGGAGG GCAAGTCGAC GGTGCGGGTG
GTCCTCCACG AGGGCCGCAA GCACATCGTG CGCCGTCTCC TGGCGGAGGT CGGGCATCCG
GTGCAGCGGC TGGTCCGCAC ACATGTGGGC ACCGTCGCCC TCGGCGACCA GCGGCCGGGG
TCGCTGCGGG TGCTCGGGCG CGACGAGGTC GAGTCGCTGT ACAAGGCGGT GGGAATGTGA
 
Protein sequence
MNRPARRDGT PDRSTPNNKR KAAPRQGPRR SPSEAPPRNN TPRLSNAKPA RTQNVPVRDP 
GDRAPSNPGG SALPDGEKIR LQKVLAQAGV ASRRVAEEMI ADGRVEVDGE IVTEQGLRVD
PSVAVVRVDG VRVVVNENLV HLALNKPRGW HSTMSDDMGR PCVGDIVAER VAAGQRLFHV
GRLDADTEGL LLVTNDGELA HRLMHPSYEV PKTYLAWVAG EVPRNLGKKL RDGVELEDGP
VTVDRFSVLE AAEGKSTVRV VLHEGRKHIV RRLLAEVGHP VQRLVRTHVG TVALGDQRPG
SLRVLGRDEV ESLYKAVGM