| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2318 |
|---|
| Symbol | |
|---|
| ID | 9156474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 2410368 |
|---|
| End bp | 2411441 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF21 |
|---|
| Protein accession | YP_003647264 |
|---|
| Protein GI | 296140021 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGACC TCCTGGCCGT CGGCCTCACC GTGCTGTTGC TCGCCGCCAA TGCGTTCTTC
GTGGCTGCCG AGTTCGCGCT CATCGCCGCC CGCCGCGACC GGCTCGAGGC GCTGGTCGAC
CAGGGGCGCG ACAGCGCCCG AGCGGTGATC AAGGCCTCGG AGAACCTCTC GCTCATGCTG
GCGGCCTGCC AGCTCGGCAT CACCATCTGC TCGATCCTGC TGGGCAAGGT GGGTGAACCC
GCCATCGCTC ATCTGTTGGA GAAGCCGATG GAGTGGGCGA ACGTGCCGGA GGCGCTGCTG
CATCCGATCT CGTTCACCAT CTCGCTCAGC CTGGTGGTGG TGCTGCACAT CCTGCTCGGC
GAGATGGTGC CGAAGAACAT CGCACTGGCC GGCCCGGAGT CGGCGGCCAT GTTGCTGGTT
CCGCCGCTCG TCGCCTTCTC GAAGCTGATG CGCCCGGTGA TCGCGGTGTA CAACTGGCTC
GCGACGCTGG TGCTGCGTGC ATTGGGCGTG GAACCTCGCG ACGAATTGGA GGGCACGATC
TCGGCGGGCG AACTGTCCGA GCTCATCGCC GAATCGCACG ACGAGGGCCT GATCGACGCG
GAGGAACAGC TGCGACTTAC CCGCGCGCTC CAGACCTCGC GACGCACCGT CGCCGATGTG
GCGATCCCGC TCGCGCAGAT CCGCGGGCTG CAGGCCGTTG CGGGGCCGGG TGGCACCTAC
GGACCCACCC TCGGCGATAT CGAATCCGCT GTCGCCGAGA CGGGCTTCTC GCGGTACCCG
GTGCGCAGCC GAGGCGGCGC TTTCACGGGC TACCTGCACG TCAAGGATGT CTTGCCCGAC
ATCATGGACG CCTCGGTCGG GCCGGACACC GTGATCGGCG CCGGCCGCAT CCGACCGCTC
CCGGTGGTCG ACGGCGCGCT CTCGCTGGAC CAGGCCACCT CGCATCTGCG TCGTCTCGGT
GGGCATCTCG CCGCCGTCGC CGACGATCAC GGTCGCACGA TCGGCATCGT CGCCCTGGAG
GACGTGGTCG AGGAGTTCGT GGGCACCGTG CGCGATGGAA CGCACCGGGT GTGA
|
|---|
| Protein sequence | MNDLLAVGLT VLLLAANAFF VAAEFALIAA RRDRLEALVD QGRDSARAVI KASENLSLML
AACQLGITIC SILLGKVGEP AIAHLLEKPM EWANVPEALL HPISFTISLS LVVVLHILLG
EMVPKNIALA GPESAAMLLV PPLVAFSKLM RPVIAVYNWL ATLVLRALGV EPRDELEGTI
SAGELSELIA ESHDEGLIDA EEQLRLTRAL QTSRRTVADV AIPLAQIRGL QAVAGPGGTY
GPTLGDIESA VAETGFSRYP VRSRGGAFTG YLHVKDVLPD IMDASVGPDT VIGAGRIRPL
PVVDGALSLD QATSHLRRLG GHLAAVADDH GRTIGIVALE DVVEEFVGTV RDGTHRV
|
|---|
| |