Gene Tpau_2269 details

Gene Information

• Locus tag: Tpau_2269
• ID: 9156425
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 2362624
• End bp: 2363184
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 69%
• Product: LGFP repeat protein
• Protein accession: YP_003647216
• Protein GI: 296139973

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTCGA AGACCACCCG GACGCTCGGT GCAGTCGTCG CCGCCGCCGC ACTCACGGTC 
AGCCTCACCG CCTGCAACTC GTCGAAAGAC GATTCCTCGG GCGACGCCGC GAGCAGCACC 
GCTGCCGCAC CGAGCAGCGC CGCCGGGTCG GGCGGCACCG GGACCGGCGC CTCCGAGTCG 
GCTCCCGTGG TTCCGTCGAC CTCCATCGCC GCCGCGGACG ACGGCCAGCA GGTGACCATC 
ACGGACGCGC CGATCATCGC GGAGTACGCG CAGTACGGCT ACGAGAAGGG CCATCTCGGT 
GCCCCGCTCG GCCCCGTGGC GGAGCTGCCG GACGGTAAGG GCAAGTTCCT CACCCTCAAG 
GGCGGCACCA TCTACTGGAG CGAAGCCAGT GGCGCACACG TGGTGCACGG TGTGATCGGC 
GATAAGTGGG GCGCGCAGGG CCACGAGAGC GGCAAGCTCG GCTACCCGAC GAGCGACGAG 
AAGTCCGAGG ACGGGGCCAT CAAGCAGACG TTCCAGAACG GCACCATCAC GTTCAAGGAC 
GGCGTCGCGA CGGTCTCCTG A 

 

Protein sequence

MNSKTTRTLG AVVAAAALTV SLTACNSSKD DSSGDAASST AAAPSSAAGS GGTGTGASES 
APVVPSTSIA AADDGQQVTI TDAPIIAEYA QYGYEKGHLG APLGPVAELP DGKGKFLTLK 
GGTIYWSEAS GAHVVHGVIG DKWGAQGHES GKLGYPTSDE KSEDGAIKQT FQNGTITFKD 
GVATVS