| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2261 |
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| Symbol | |
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| ID | 9156417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 2350723 |
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| End bp | 2352960 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_003647209 |
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| Protein GI | 296139966 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.252238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCGC AGCAGCAGAC CATCATCTAC ACGCTGACCG ACGAGGCGCC CCTACTGGCC
ACGGCAGCGT TCCTGCCGAT CATCCGCACG TTCGCCGGCC CCGCCGGCAT CGACGTGCAG
ACCAGCGACA TCTCGGTCGC GGCGCGCATT CTGGCGGCCT TCCCGGAGCG GTTGACCGAG
GAGCAGCGGG TCACCGACAA CCTCGCCGCC CTCGGCGAGC TGACCCAGGA CCCGTCCGCC
AACATCATCA AGCTTCCGAA CATCTCCGCG TCGGTGCCCC AGCTGCTGGC GGCCATCACC
GAGCTACAGG AGAAGGGGTA CGACATCCCC GATCTGCCCT CGGAGCCGAA GACCGACGAG
GAGCGCGATA TCGCCACGCG CTATTCGACG ATCCTCGGCA GTGCCGTGAA TCCGGTACTG
CGCCAGGGTA ACTCCGATCG GCGCGCACCC AAGGCCGTCA AGGAGTACGC CCGCAAGCAT
CCGCACAGCA TGGGCGAATG GTCGATGGCC TCGCGCAGCC ACGTGGCGCA CATGAAGCAC
GGCGACTTCT ACCACGGCGA GAAGTCGATG ACGATCGACA AGGACCGCGA CGTCCGCATG
GAGCTGGTGA CCGCCGACGG CAACACCAAC GTGCTCAAGC CCAGTGTCAC GCTCGGCCCC
GGCGATGTCA TGGACTCGAT GTTCATGAGC AAGAAGGCCC TTCTCGACTT CTACGAGGAG
CAGATGCAGG ACGCCTACGA GACGGGCGTG ATGTTCTCGC TGCACGTGAA GGCGACGATG
ATGAAGGTCT CGCACCCGAT CGTGTTCGGT CACGCGGTGC GCGTCTTCTA CAAGGAGGCC
TTCGCCAAGC ACCACGACCT GTTCGAGGAG CTCGGGGTCA ACGTCAACAA CGGCTTGGGT
GACCTGTACG ACAAGATCGC GACCCTGCCG GCATCGAAGC ATGAGGAAAT CGTCAAGGAT
CTGCACGCCT GTCATGAGCA TCGTCCGGAG CTGGCGATGG TCGACTCCGC CCGGGGCATC
TCGAATTTCC ACTCGCCGTC CGATGTGATC GTCGACGCCT CGATGCCCGC CATGATCCGT
GCCGGCGGCA AGATGTACGG CGCCGACGGC CGCACCAAGG ACACCAAGGC CGTGATGCCG
GAATCCACCT TCGCGCGCAT CTACCAGGAG ATCATCAACT TCTGTAAGAC CAACGGGGCC
TTCGATCCGC GCACCATGGG CACTGTTCCC AACGTGGGCC TGATGGCGCA GAAGGCCGAG
GAGTACGGCA GCCACGACAA GACCTTCGAG GTGCCCGCGG CCGGCACCGC GAACATCGTG
GACAACGCCA CCGGCGAGGT GCTGCTCTCC CAGGAGGTCG AAGAGGGCGA CATCTGGCGC
ATGTGCACCG TCAAGGACGC CCCGATCCGC GACTGGATCA AGCTCGCCGT CAACCGCGCC
CGCAATTCCG GTACGCCCGT GTTGTTCTGG CTCGACCCGT ACCGTCCGCA CGAGAACGAG
CTGATCGCCA AGGTCAAGGC GGAGCTGGAG AACTACGACA CCGAAGGCCT GGACATCCAG
ATCATGTCCC AGGTGCGCGC TATGCGGTAC ACCCTCGAAC GCGCGATGCG CGGCCTCGAC
ACGATCGCCG CCACCGGAAA CATCCTGCGT GACTACCTCA CCGACCTGTT CCCGATTCTC
GAGCTCGGCA CGTCGGCCAA GATGCTCTCG ATCGTTCCGC TGATGGCGGG CGGCGGTATG
TACGAAACCG GCGCCGGCGG TTCCGCGCCC AAGCACGTCA AGCAGCTCGT CGAGGAGAAC
CACCTGCGTT GGGATTCGCT CGGCGAGTTC CTCGCGCTCG CGGTGAGCCT CGAGGAGACG
GGCCTGAAGA ACGACAACAA GCACGCGGTC ACCTTGGCCA AGACGCTCGA CGCCGCCACC
GGCAAGCTGC TGGAGAACAA CAAGGCCCCG TCGCGCAGCA CCGGCGAACT CGACAACCGA
GGCAGCCAGT TCTACCTCGC TCTGTACTGG GCGCAGGAGT TGGCCGCGCA GACCGACGAT
CCGGAATTGG CGGAGAAGTT CGCGCCGTTG GCTGCTGCGC TCGCCGAGCA CGAGGAGACC
ATCGTGGCCG AGCTCGCCGC GGTGCAGGGG GAGCCGGCCG ACATCGGCGG CTACTACTAC
CCGGATCCCG AGAAGATGGC GACGGTGATG CGACCGAGCG CGACCTTCAA CGCCGATCTG
GACTCCGTGC AGTCCTGA
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| Protein sequence | MSAQQQTIIY TLTDEAPLLA TAAFLPIIRT FAGPAGIDVQ TSDISVAARI LAAFPERLTE
EQRVTDNLAA LGELTQDPSA NIIKLPNISA SVPQLLAAIT ELQEKGYDIP DLPSEPKTDE
ERDIATRYST ILGSAVNPVL RQGNSDRRAP KAVKEYARKH PHSMGEWSMA SRSHVAHMKH
GDFYHGEKSM TIDKDRDVRM ELVTADGNTN VLKPSVTLGP GDVMDSMFMS KKALLDFYEE
QMQDAYETGV MFSLHVKATM MKVSHPIVFG HAVRVFYKEA FAKHHDLFEE LGVNVNNGLG
DLYDKIATLP ASKHEEIVKD LHACHEHRPE LAMVDSARGI SNFHSPSDVI VDASMPAMIR
AGGKMYGADG RTKDTKAVMP ESTFARIYQE IINFCKTNGA FDPRTMGTVP NVGLMAQKAE
EYGSHDKTFE VPAAGTANIV DNATGEVLLS QEVEEGDIWR MCTVKDAPIR DWIKLAVNRA
RNSGTPVLFW LDPYRPHENE LIAKVKAELE NYDTEGLDIQ IMSQVRAMRY TLERAMRGLD
TIAATGNILR DYLTDLFPIL ELGTSAKMLS IVPLMAGGGM YETGAGGSAP KHVKQLVEEN
HLRWDSLGEF LALAVSLEET GLKNDNKHAV TLAKTLDAAT GKLLENNKAP SRSTGELDNR
GSQFYLALYW AQELAAQTDD PELAEKFAPL AAALAEHEET IVAELAAVQG EPADIGGYYY
PDPEKMATVM RPSATFNADL DSVQS
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