Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2259 |
Symbol | |
ID | 9156415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 2348530 |
End bp | 2349909 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | amine oxidase |
Protein accession | YP_003647207 |
Protein GI | 296139964 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00770255 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGATG TTGATGTGAT CGTGGTGGGT GCGGGACTGG CGGGGCTATC CGCGGCGCGG GCGCTGGTTG CCGCGGGAAA GACCGTGCGC GTCCTGGAGG CGCGCGAGCG CGTAGGTGGC CGCAATCTCG GCGGCGAGCT GAGCAATGGC GTCGCCGTCG AACTCGGCGG CCAGTGGATC GGTCCCGACC AGAGCGCAGC GCGTGAGCTC ATCGCGGAGC TCGGACTCGC GCTGTATCCG ACGTACGACG AGGGCGATGC CATCACCGTC ATCGACGGCC GCGTCGTGCG CTACAGCGAC GAGAGCTTCG GCTTCCCCTC GACGACCCTC GCGGAAGTCG CTCGCCTGTG GACAGACCTG GAGGGCCTTG CGGCCGGCGT CTCGCCCGCC GCGCCGTGGG AGGCCGCCGG TGCCGAGGAT CTCGACCGGC ACAACGTCGA CACCTGGCTG TCCGCGAACA CCCACGATGA GCTCGCCCGC TCCTTCTTCC GGATCATCGT GCCCGCCGTA TTCTCCGCGG AGACAGCCGA GCTTTCCCTC CTTCACTTCC TCGCCTATAT CCGATCGGGC ACGAATCTCG CCACGCTCAT CGCCACCCGG GGTGGAGCGC AGGACGCGCG GGTGGCTGGC GGCCCGCACC TGATCTCCGA GAAGATGGCC GAGCAGCTCG GCGCCGCGGT GCAGCTGGGG GCCGTGGTCC GCACCATCAA CCACGACGAT GCCGGCGTCA CGGTCAGTTA CGAGGCGGTG GACGGCGGCC CCGGTGCGAC GGTCAGCGCG GACTCCGTGA TCGTGGCGAT CCCCCCGACG CTCGCCGGCC GGATCCGGTA CCTGCCGCCG CTGCCCAGCG CCAGAGACGG TCTCACCCAG CAGATCCCCG CCGGGTCGGT GATCAAATTC CAGGTCGGGT ACGCGAGACC GTTCTGGCGC GATCACGGAC TCAGCGGCTT CGTGATCAGT CTCGACGACG CTTTCAATGT GGTTCTGGAC AATTCGCCCG CCGACGGTCG ATGCGGCGTA TTGGCCGGTT TCCTCGAGGG CAGGCACGCG CGCGAGGCGG CGGCGCTCAC GGCCGAACAG CGGCGTGCGC AGGTGATCGC ATCGCTTGTG AAGTACTTCG GCGAGGAGGC CGCCGACCCC TTCGATGTGC TCGAACTCGA TTGGGCGGAC GAGGAATTCA CCCGCGGTTG CTATGGCGGA CGGCTCGGCA GCGGGGTATG GACGCAGTTC GGTGCGGCGC TCGCCGCACC GGTCGGCCGT ATTCACTGGG CGGGCGCAGA GACCGCGGAT CGGTGGAACG GGTACATGGA CGGCGCGATT CGATCGGGGC GCCGCGCCGC AGCGAATATT CTATCCGCTG GGGGCGAGCC TTTACTGTAG
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Protein sequence | MPDVDVIVVG AGLAGLSAAR ALVAAGKTVR VLEARERVGG RNLGGELSNG VAVELGGQWI GPDQSAAREL IAELGLALYP TYDEGDAITV IDGRVVRYSD ESFGFPSTTL AEVARLWTDL EGLAAGVSPA APWEAAGAED LDRHNVDTWL SANTHDELAR SFFRIIVPAV FSAETAELSL LHFLAYIRSG TNLATLIATR GGAQDARVAG GPHLISEKMA EQLGAAVQLG AVVRTINHDD AGVTVSYEAV DGGPGATVSA DSVIVAIPPT LAGRIRYLPP LPSARDGLTQ QIPAGSVIKF QVGYARPFWR DHGLSGFVIS LDDAFNVVLD NSPADGRCGV LAGFLEGRHA REAAALTAEQ RRAQVIASLV KYFGEEAADP FDVLELDWAD EEFTRGCYGG RLGSGVWTQF GAALAAPVGR IHWAGAETAD RWNGYMDGAI RSGRRAAANI LSAGGEPLL
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