Gene Tpau_2165 details

Gene Information

• Locus tag: Tpau_2165
• ID: 9156321
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 2258781
• End bp: 2259347
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 69%
• Product: transcriptional regulator, TetR family
• Protein accession: YP_003647114
• Protein GI: 296139871

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.289199
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACCCC GTGCGGATGC GGTCAGGAAC CGGCAGAAGC TGCTCGACGC GGCGATGCGG 
CTGTTCGCCG AACACGGCAT CGACGTGCCC CTGGACCGGA TCGCCAGAGA GGCGGGCGTC 
AGCATCGGCA CGCTCTACAA CAACTTTCCG GACCGTGGCG CGCTCCTGGA CGAACTTCTC 
CCGGAGCGAC TCGCGGAATT GGAGCGGCTC GCGCGCGCGA GCGCGGATGC AGCCGACCCG 
TGGACCGGAT TCTCCGGCTT CTTCGAGGCG ATGTTCGCAG GCCAGGCTCA TGACCGCGCC 
GCGAACGAGG CGATGTCACG AGGGCCGATC GGCGACGTGG ATCTGATGGC CGAATGCGGT 
CGGTCCGGTA GCGCCGTGCG CGGCGTCCTC GACCGAGCGC ACGATGCGGG AGTGGTCCGC 
AAGGACTTCG ACCATCTCGA CCTTGCGGCT CTCATGGTGG CGGTCGCCTC GGTCATCCGC 
GCCACCCCCG GTGACGACGC CCGCTGGCGC CGTCATCTGC GTTTCCACTT CGACGGCATC 
CGGGCAGGAC GGGGCTCCGA CGTCTGA 

 

Protein sequence

MSPRADAVRN RQKLLDAAMR LFAEHGIDVP LDRIAREAGV SIGTLYNNFP DRGALLDELL 
PERLAELERL ARASADAADP WTGFSGFFEA MFAGQAHDRA ANEAMSRGPI GDVDLMAECG 
RSGSAVRGVL DRAHDAGVVR KDFDHLDLAA LMVAVASVIR ATPGDDARWR RHLRFHFDGI 
RAGRGSDV