Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2144 |
Symbol | |
ID | 9156300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 2235284 |
End bp | 2239015 |
Gene Length | 3732 bp |
Protein Length | 1243 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | methionine synthase |
Protein accession | YP_003647094 |
Protein GI | 296139851 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.212238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCTCCT TTGAGCCGAA CATCCGCCCC GACTGCACCG ACGAGCTGGC GGCTACTCTG CGCCGGCGGA TCATGGTGAT CGACGGCGCG ATGGGCACGG CGATCCAGCG GGACCGGCCG GATGAGGATG GATACCGCGG CGAGCGGTTC ACGGAGTGGC CGACGGCTCT TCAGGGCAAC AATGACCTGC TCAATCTGAC GCAGCCGCAG ATCATCGAGG GGATCCACCG CGAATATCTC GAGGCGGGCG CAGACATCCT GGAGACGAAC ACGTTCAACG CGAACGCGAT CTCGCTCTCC GACTACGACA TGGGCGAGCT GAGTTACGAG CTGAACTTCG TCGGTGCCGC CCTGGCTCGC AAGGTATGTG ACGAGTTCAG CACCGCGGAC AAGCCCCGCT ACGTCGCCGG CGCCCTCGGG CCGACGACGC GGACCGCGTC GATCTCGCCG GAAGTCAACG ATCCGGGGGC CCGCAACGTC TCCTACGATC AACTGGTCGC CGCCTACCTC GAAGCTGTCA ACGGCCTTGT CGACGGTGGT TCAGATGTGA TCCTCATCGA GACGATCTTC GATTCGCTCA ACGCCAAGGC GGCGGTGTTC GCGGTCGAGA CGCTGTTCGA GGATCGCGGG CGCCGCTGGC CGGTGATCAT CTCGGGGACG ATCACTGATG GTTCTGGGCG GACGTTATCC GGTCAGGTCA CGGAAGCATT CTGGAACGCG ATCAGGCACG CGAAGCCGAT AGCGGTGGGT CTCAATTGCG CCCTGGGTGC GCCGGAGATG AGGCCCTACA TCGCCGAGAT GGCGCGGATC TCGGACACGT TCGTCTCCTG CTATCCGAAC GCGGGCCTGC CGAACGCCTT CGGCGAGTAC GACGAGTCTC CGGAGCACCA GGCCGCCTAC CTGGCCGAAT TCGCCGAGGC CGGTCTGGTC AACCTGGTGG GCGGCTGCTG CGGTACGGCG CCGGCGCACA TCGCCGAGAT CGCCAGGGTC GTCGAGGGCA CGCCGCCGCG TGAGATTCCG CAACTCTCGG TGGCCACCAG GCTGTCGGGT CTGGAACCGC TCAACATCAC CGCCGACTCC CTGTTCGTGA ACATCGGCGA ACGCACCAAT ATCACCGGCT CGGCACGGTT CCGCAACCTG ATCAAGGCGG AGGACTACGA CACCGCCCTG TCAGTCGCCC TGCAACAGGT CGAGGTCGGT GCCCAGGTCA TCGACATCAA CATGGACGAG GGAATGATCG ACGGTGTCGC CGCGATGGAC CGGTTCACCA AGCTGATCGC GGCCGAACCG GATATCAGTC GTGTCCCGGT GATGATCGAC TCCTCCAAGT GGGAGGTCAT CGAAGCCGGC CTGAAGAACG TGCAGGGCAA GCCGATCGTC AACTCGATCT CGTTGAAGGA GGGCGAGGAG AAGTTCATCC GCGAGGCGCG GCTGTGCCGC AAGTACGGCG CCGCCGTCGT TGTGATGGCC TTCGACGAAC AGGGGCAGGC CGATAACCTG GAACGTCGTA AGGAGATCTG CGGGCGCGCC TACCGGATCC TGACCGAAGA GGTCGGCTTC CCGGCCGAGG ACATCATCTT CGACCCGAAC TGCTTCGCAT TGGCGACCGG TATCGAGGAG CACGCGACCT ACGGCATCGA CTTCATCGAG GCCTGTGCCT GGATCAAGGA GAACCTCCCC GGGGTGCACA TCTCCGGTGG CATCTCGAAC GTGTCGTTCT CCTTCCGTGG CAACAACCCC GTGCGCGAGG CCATCCACGC GGTGTTCCTG TTCCACGCCA TCAAGGCCGG ATTGGACATG GGCATCGTCA ACGCCGGAGC CCTGGTGCCG TACGACGCGA TCGACCCCGA GCTGCGGGAC CGCATCGAGG ACGTGGTGCT CAACCGTCGC GAGGACGCGG CCGAACGGCT CTTGGAGATC GCCGAGCAGT TCAACAAGTC CGAGAAGGCC GAGGATCCCA AGGCCGCCGA GTGGCGCGGC CTCCCGGTGC GCGAGCGGAT CACGCACGCC CTGGTCAAGG GCATCGACGC CGATGTCGAG ACCGACACCG AGGAGTTGCG CGCCGAGATC GCCGCTGCGG GAGGGCGGCC GATCGAGGTG ATCGAGGGGC CGCTGATGGA CGGTATGAAC GTTGTCGGTG ACCTCTTCGG TGCAGGCAAG ATGTTCCTCC CCCAGGTCGT GAAGTCGGCG CGGGTGATGA AGAAGGCCGT GGCCTACCTG CTGCCGTACA TCGAGGCGGA GAAGGACGAG TCGGGCGCCG CGAGTAAGGA CACCAACGGC ACCATCATCA TGGCGACGGT GAAGGGCGAT GTTCACGACA TCGGCAAGAA CATCGTCGGG GTCGTCCTTC AGTGCAACAA CTACGAGGTG ATCGACCTCG GCGTGATGGT GCCCGCCGAG AAGATCCTGG CCGCCGCCAA GGAGTACGAC GCTGACATCA TCGGTCTGTC CGGCCTGATC ACCCCGTCTC TGGACGAGAT GGTCAACTTC GCCGTCGCGA TGGAACGCGA AGGGTTGGAC ATCCCGCTCC TGATCGGTGG CGCGACGACG TCCCGCGCGC ACACGGCCGT GAAGGTGTCG CCACGCCGCA GCGGTCCGGT CGTCTGGGTC AAGGACGCCT CGCGTTCGGT GCCGGTGGCG GCCGCGCTGC TCGACGACAG GCAGCGTCCG GCCCTACTGG AGGCCACCGA GGCCGATTAC GCCGCGCTGC GCGAACGGCA CGCCCAGAAG AGTGAACGGC CGATGCTGAC GCTGGAGAAG GCTCGCGCCA ACCGGACGCC GATCGAGTGG GCCGCCTATA CGCCGCCGGT GCCCGCCCAG GGGCTCGGCG TCCGTGAGTT CTTGGATTAC GACCTCGCTG AGCTGCGCGA GTACATCGAC TGGCAGCCGT TCTTCAACGC GTGGGAAATG AAGGGCCGGT TCCCTGACAT CCTCAACAAT CCGGTCTCGG GCGAGACCGC CCGCAAGCTG TACGACGATG CCCAGACGAT GCTCGACACC CTGATCAAGG AGAAGTGGCT CACCGCCAAC GGCGTGATCG GGTTCTTCCC CGCGAACGCC GTCGGCGACG ATATCGAGGT CTACACCGAC GAGACCCGTA CCGACGTGCT GACCAGATTG CACAACCTGC GCCAGCAGGG CGAACACCGC GACGGCATCC CGAACCGGAG CCTCGGCGAC TTCGTTGCGC CGAAGGACAC CGGTCTGGCC GATTACGTCG GTGCCTTCGC CGTCACCACG GGCCTCGGCA GCGCCGCCAA GATCGTCGAG TTCAAGGCTG CTAACGACGA CTACAACGCA ATCCTGCTGG AGTCGCTCGC CGACCGATTG GCTGAGGCCT TCGCAGAACG GATGCATCAA CGGGTCCGTA CGGAGTTCTG GGGATTCCAG CCTGACGAGG ATCTCGACAA CGAGGCGCTC ATCGATGAGA AATATGTGGG AATCCGCCCT GCTCCCGGTT ACCCGGCCTG CCCGGAACAC ACCGAGAAGG CGACACTCTG GGAGTTGATG AACGTCCACG AGCGGACCGG CATCGAGCTG ACCGAGTCGA TGGCGATGTG GCCCGGTGCC GCCGTCAGCG GCTGGTACTT CTCGCATCCG CAGTCGCAGT ACTTCGTGGT CGGCCGGTTG GCGCAGGACC AGGTAGCAGA CTACGCGAAG CGCAAGGGCT GGACTCTGCA GGAAGCCGAG CGCTGGCTCA GCCCCAACCT CGGCTACAAC CCGGAGGACT GA
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Protein sequence | MSSFEPNIRP DCTDELAATL RRRIMVIDGA MGTAIQRDRP DEDGYRGERF TEWPTALQGN NDLLNLTQPQ IIEGIHREYL EAGADILETN TFNANAISLS DYDMGELSYE LNFVGAALAR KVCDEFSTAD KPRYVAGALG PTTRTASISP EVNDPGARNV SYDQLVAAYL EAVNGLVDGG SDVILIETIF DSLNAKAAVF AVETLFEDRG RRWPVIISGT ITDGSGRTLS GQVTEAFWNA IRHAKPIAVG LNCALGAPEM RPYIAEMARI SDTFVSCYPN AGLPNAFGEY DESPEHQAAY LAEFAEAGLV NLVGGCCGTA PAHIAEIARV VEGTPPREIP QLSVATRLSG LEPLNITADS LFVNIGERTN ITGSARFRNL IKAEDYDTAL SVALQQVEVG AQVIDINMDE GMIDGVAAMD RFTKLIAAEP DISRVPVMID SSKWEVIEAG LKNVQGKPIV NSISLKEGEE KFIREARLCR KYGAAVVVMA FDEQGQADNL ERRKEICGRA YRILTEEVGF PAEDIIFDPN CFALATGIEE HATYGIDFIE ACAWIKENLP GVHISGGISN VSFSFRGNNP VREAIHAVFL FHAIKAGLDM GIVNAGALVP YDAIDPELRD RIEDVVLNRR EDAAERLLEI AEQFNKSEKA EDPKAAEWRG LPVRERITHA LVKGIDADVE TDTEELRAEI AAAGGRPIEV IEGPLMDGMN VVGDLFGAGK MFLPQVVKSA RVMKKAVAYL LPYIEAEKDE SGAASKDTNG TIIMATVKGD VHDIGKNIVG VVLQCNNYEV IDLGVMVPAE KILAAAKEYD ADIIGLSGLI TPSLDEMVNF AVAMEREGLD IPLLIGGATT SRAHTAVKVS PRRSGPVVWV KDASRSVPVA AALLDDRQRP ALLEATEADY AALRERHAQK SERPMLTLEK ARANRTPIEW AAYTPPVPAQ GLGVREFLDY DLAELREYID WQPFFNAWEM KGRFPDILNN PVSGETARKL YDDAQTMLDT LIKEKWLTAN GVIGFFPANA VGDDIEVYTD ETRTDVLTRL HNLRQQGEHR DGIPNRSLGD FVAPKDTGLA DYVGAFAVTT GLGSAAKIVE FKAANDDYNA ILLESLADRL AEAFAERMHQ RVRTEFWGFQ PDEDLDNEAL IDEKYVGIRP APGYPACPEH TEKATLWELM NVHERTGIEL TESMAMWPGA AVSGWYFSHP QSQYFVVGRL AQDQVADYAK RKGWTLQEAE RWLSPNLGYN PED
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