Gene Tpau_2130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2130 
Symbol 
ID9156286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2221170 
End bp2222252 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content70% 
IMG OID 
Productdihydroorotate dehydrogenase 
Protein accessionYP_003647080 
Protein GI296139837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.540682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTCGC TCTACCAGGT GCTGCTGCGC ACGATGTTCC TGATCTCGCC CGAGCGCATC 
CATCACCTCG TGTTCGGGCT GATCCGGGGC ACCACCGCTG TGCCGCCGGT GCGGACCGGG
TTGCGCCGGG CGATCGCCTT CCGTGACCCG GTCCTCACCC AGACCGTGTT CGGCGTGGAG
TTCCCGTCGC CGGTCGGGCT CGCCGCCGGG TTCGATAAGA ACGCGCGCGC CGTCAACGGA
TGGGGTCCGC TCGGTTTCGG CTTCGCGGAG ATCGGCACCG TCACCGCACA CGCCCAACCC
GGCAACCCCG CGCCCCGGCT CTTCCGACTC CCCCGGGACC ATGCACTGAT CAACCGGATG
GGCTTCAACA ACTACGGCTC CGGGGCAGCG GCGAACGAGT TGCGCAAGCG CGACGCCGGG
CCCTCGGCGG TCCCGATCGG CGCCAATATC GGTAAGACCA AGGCGACCCC GCTCGATGGG
GCCGCCGACG ACTACCGGGT CAGCGCGATG CTGCTCGGAC CTCTGGCGGA CTTCATCGTG
GTCAATGTGT CGTCGCCGAA CACGCCCGGC CTGCGTGATC TCCAGGCCAC CGAATCACTG
CGGCCGGTTC TGCAAGCGGT ACTCGACACC GTGAGCGTCC CCGTCCTGGT GAAGATCGCG
CCCGATCTCG CCGATGAGGA CGTCGACGCC GTCGCCGACT TGGCACTCGA GCTCGGCTTG
GCCGGCATCG TCGCCACCAA CACCACGATC AGCCGCGAGG GTCTGCGCAC ACCCGCGGCG
GAGGTCGAGG CGATCGGGGC GGGCGGACTG TCCGGACACC CGGTGAAGGC GCGCTCGCTG
GAGGTGCTGC GCCGCCTGTC CGCCCGCGTG GGTGACCGCC TCGTACTGAT CTCCGTCGGC
GGCATCGAGG ACGTCGACGA CGTGTACCAG CGCATCCGCG CCGGCGCTTC GCTGGTGCAG
GTGTACACCC AGTTCATCTA CGGCGGCCCG CTGTGGGTGC GCACGGTGCA GAAGCAGCTC
GCGGAGCGGC TGCGCGCCGA CGGCTTCGCG TCGATCTCCG AGGCCGTCGG CGTGGACCGC
TGA
 
Protein sequence
MSSLYQVLLR TMFLISPERI HHLVFGLIRG TTAVPPVRTG LRRAIAFRDP VLTQTVFGVE 
FPSPVGLAAG FDKNARAVNG WGPLGFGFAE IGTVTAHAQP GNPAPRLFRL PRDHALINRM
GFNNYGSGAA ANELRKRDAG PSAVPIGANI GKTKATPLDG AADDYRVSAM LLGPLADFIV
VNVSSPNTPG LRDLQATESL RPVLQAVLDT VSVPVLVKIA PDLADEDVDA VADLALELGL
AGIVATNTTI SREGLRTPAA EVEAIGAGGL SGHPVKARSL EVLRRLSARV GDRLVLISVG
GIEDVDDVYQ RIRAGASLVQ VYTQFIYGGP LWVRTVQKQL AERLRADGFA SISEAVGVDR