Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2130 |
Symbol | |
ID | 9156286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 2221170 |
End bp | 2222252 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | dihydroorotate dehydrogenase |
Protein accession | YP_003647080 |
Protein GI | 296139837 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.540682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGTCGC TCTACCAGGT GCTGCTGCGC ACGATGTTCC TGATCTCGCC CGAGCGCATC CATCACCTCG TGTTCGGGCT GATCCGGGGC ACCACCGCTG TGCCGCCGGT GCGGACCGGG TTGCGCCGGG CGATCGCCTT CCGTGACCCG GTCCTCACCC AGACCGTGTT CGGCGTGGAG TTCCCGTCGC CGGTCGGGCT CGCCGCCGGG TTCGATAAGA ACGCGCGCGC CGTCAACGGA TGGGGTCCGC TCGGTTTCGG CTTCGCGGAG ATCGGCACCG TCACCGCACA CGCCCAACCC GGCAACCCCG CGCCCCGGCT CTTCCGACTC CCCCGGGACC ATGCACTGAT CAACCGGATG GGCTTCAACA ACTACGGCTC CGGGGCAGCG GCGAACGAGT TGCGCAAGCG CGACGCCGGG CCCTCGGCGG TCCCGATCGG CGCCAATATC GGTAAGACCA AGGCGACCCC GCTCGATGGG GCCGCCGACG ACTACCGGGT CAGCGCGATG CTGCTCGGAC CTCTGGCGGA CTTCATCGTG GTCAATGTGT CGTCGCCGAA CACGCCCGGC CTGCGTGATC TCCAGGCCAC CGAATCACTG CGGCCGGTTC TGCAAGCGGT ACTCGACACC GTGAGCGTCC CCGTCCTGGT GAAGATCGCG CCCGATCTCG CCGATGAGGA CGTCGACGCC GTCGCCGACT TGGCACTCGA GCTCGGCTTG GCCGGCATCG TCGCCACCAA CACCACGATC AGCCGCGAGG GTCTGCGCAC ACCCGCGGCG GAGGTCGAGG CGATCGGGGC GGGCGGACTG TCCGGACACC CGGTGAAGGC GCGCTCGCTG GAGGTGCTGC GCCGCCTGTC CGCCCGCGTG GGTGACCGCC TCGTACTGAT CTCCGTCGGC GGCATCGAGG ACGTCGACGA CGTGTACCAG CGCATCCGCG CCGGCGCTTC GCTGGTGCAG GTGTACACCC AGTTCATCTA CGGCGGCCCG CTGTGGGTGC GCACGGTGCA GAAGCAGCTC GCGGAGCGGC TGCGCGCCGA CGGCTTCGCG TCGATCTCCG AGGCCGTCGG CGTGGACCGC TGA
|
Protein sequence | MSSLYQVLLR TMFLISPERI HHLVFGLIRG TTAVPPVRTG LRRAIAFRDP VLTQTVFGVE FPSPVGLAAG FDKNARAVNG WGPLGFGFAE IGTVTAHAQP GNPAPRLFRL PRDHALINRM GFNNYGSGAA ANELRKRDAG PSAVPIGANI GKTKATPLDG AADDYRVSAM LLGPLADFIV VNVSSPNTPG LRDLQATESL RPVLQAVLDT VSVPVLVKIA PDLADEDVDA VADLALELGL AGIVATNTTI SREGLRTPAA EVEAIGAGGL SGHPVKARSL EVLRRLSARV GDRLVLISVG GIEDVDDVYQ RIRAGASLVQ VYTQFIYGGP LWVRTVQKQL AERLRADGFA SISEAVGVDR
|
| |