Gene Tpau_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2109 
Symbol 
ID9156264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2199565 
End bp2200578 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content70% 
IMG OID 
Product3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein 
Protein accessionYP_003647059 
Protein GI296139816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.92488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCCC GAATCGCCGG CCTCGCCTCC TACCTCCCCG AGAAACGGGT CCCGGCGGAG 
TACTTCCGCG AGTTCGCCGA CGCCGACAGC CGCACCCTGT CGGACAATCC GATGTTCGCG
CCACCTGCGT TCCGGCATCA TGCAGCGCCG GGGGAGTCGA ATGTGGACCT GATGTGCGCG
GCGATCGGCA GGCTGCGCGA GCAGGTGGGC GGCAATGCCA TCGACCACGT CGAGGTGATC
TTCACCCACT CCCAGCTACC GGACCTGCCC GTTGTGGGCT GCGGCGGAGA CGTCGCTCGC
AGGCTCCGGA TCACCCCGTC ACTGGTCCTG GACCTGCACA ACGGTGGCTG CGCCGCCTTC
ATACTCATGC TGCACCTGGC TCGCACGGTG TTCGCCGCCG GCGGCGCGCA CAGCGCGTTG
CTGCTCACCG CGACCAACGC CGCCGGCACT GTGTTCACCC AGGACCGGGT CCGCGTACTG
CCCCAGGCGG CGATTCCCGG AGACGGTTCC GCCGCCGCGC TGGTCACCGC AGACCCGGAC
GCCGGCGGTA TCGCAGTGCG GGAGGTGGTG ATCGCGCAGC ACAGCGAATA CGCGGGCGAT
ATGACCGCCG CGATCGACCC CCCACGCAAG TACTGGGAGC CCGGCACCGG GCAATTGCAC
GTGGGTTTCA CCGAATCCAA GATCGCCTCG GTGCTGGCCC GCGGCAACCG ACTCGTGCCC
GAGGTCACGC TCGCCGCCGC GGCAGCCTGC GGGCTGCACG GCCCGCAGGT GGGGCACCTC
GTGACCAATC AGCCGAACCG CACTTTCCTG CGCAACTGGC GGGAAGCCCT GGAGCTGCCG
CCGGACCGTC ATCCGGACAC GTTCGACGAA TGCGGCAACC TGTTCGCGGT CGGCGTCCCG
CACACCCTGG CGACGGCGTA CGCAGACGGC CGGATCGCGA GCGGGGAGTC GGTGGTACTG
GGCGCGTTCG CGCACGCCGG TGACTTCGCC GCCGGGGCGC TGCTCGAGAC CTGA
 
Protein sequence
MSARIAGLAS YLPEKRVPAE YFREFADADS RTLSDNPMFA PPAFRHHAAP GESNVDLMCA 
AIGRLREQVG GNAIDHVEVI FTHSQLPDLP VVGCGGDVAR RLRITPSLVL DLHNGGCAAF
ILMLHLARTV FAAGGAHSAL LLTATNAAGT VFTQDRVRVL PQAAIPGDGS AAALVTADPD
AGGIAVREVV IAQHSEYAGD MTAAIDPPRK YWEPGTGQLH VGFTESKIAS VLARGNRLVP
EVTLAAAAAC GLHGPQVGHL VTNQPNRTFL RNWREALELP PDRHPDTFDE CGNLFAVGVP
HTLATAYADG RIASGESVVL GAFAHAGDFA AGALLET