Gene Tpau_2101 details

Gene Information

• Locus tag: Tpau_2101
• ID: 9156256
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 2189832
• End bp: 2190596
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 69%
• Product: transcriptional regulator, GntR family
• Protein accession: YP_003647052
• Protein GI: 296139809

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.608039
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGCAG GTCAGCCGCT CCACCATCGC CTCGCGGCGG AGTTCCGCGG TCGGATCGCC 
GCGGGCACCT GGCCCGAGGG TCAGCAGGCG CCGAGCGAGG CGGCGTTATG CGAGGAGTTC 
GGAACCTCGC GCGGCCCGGT GCGACAAGCG CTTGCGACGC TCCGTGCCGA GGGACTCATC 
GTCGGAGGTC AAGGTCGATC ACCGGTGGTG CGCCGGAATG TGGCCAGCCA CTCCGCCAGT 
GCCCTGGGCT CGTTCACGGC GTGGGCCCGC GAACACGGCC GTGAACCGGG CCAGCGCACC 
ACATTGCAGG CGCGAGTGCC GGCCTCGGCG GAACTTGCCG AGCGCCTACA GATCGAGCCG 
GGGGAGCCCG TGCTCGCGCT CCGTCGAGTG CGCACCCTGG ACGGCGCGCC TGCGCTCCGG 
GAGGAGATGT ATTTCGTCTG GGACCTGGGA CGTCAGTTGA TGGAGTTCGA CCCGGATTCC 
GGCTCGGTGA ACCGTTTCCT GCTCGACCGG GGAGCCGATC TTTTCGCCTC CACCCACCGA 
CTCGACGCCG TGGCGGCGAC CGCCGACGAT GCGGCCGATC TTCTCCTCGC CGAGGGAGCG 
CCGTTGCTGC GCGTGCGGCG CACCACCACG GATTCCGCGG GCGACATCGT CGAATACTCC 
GAGGACAGGT ACGTGCCCGG CGTGACCACC GTGACCGTCG AGAACCGTCT CTTCGCAGCC 
CCGAACGCAG CGCTGCGATC CGTCGCCGTC AGGAGAAACG CATGA 

 

Protein sequence

MSAGQPLHHR LAAEFRGRIA AGTWPEGQQA PSEAALCEEF GTSRGPVRQA LATLRAEGLI 
VGGQGRSPVV RRNVASHSAS ALGSFTAWAR EHGREPGQRT TLQARVPASA ELAERLQIEP 
GEPVLALRRV RTLDGAPALR EEMYFVWDLG RQLMEFDPDS GSVNRFLLDR GADLFASTHR 
LDAVAATADD AADLLLAEGA PLLRVRRTTT DSAGDIVEYS EDRYVPGVTT VTVENRLFAA 
PNAALRSVAV RRNA