Gene Tpau_2087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2087 
Symbol 
ID9156242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp2177196 
End bp2177816 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content68% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003647038 
Protein GI296139795 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0227018 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGCAC CGCAGACCAG ACCGGATACC CGCGCGCAGA TCCTGCGTGC CGCCCTCGAC 
TGGGTGGACG AGGCGGGGCT GACCCGGATC TCGATGGGCG CACTCGCCAA GCGGGCACGG 
CTTGCCCGGG CGACCCTGTA CCAGCACTTC ACCGGCAAGG AGGCGCTGGT CGATGCCGTG 
GTCGCCAGCG AGTTGGACAA GTTCTACAGC CGGATTCACG ACTACGCCGA CGGGATCGAG 
GACAATCGCG AGCGGCTCGC TGCCGGGTTC GCTTACGCCT ACGCCTACCT GCGGGAGCAC 
CGTGCGCTGC AGCGAGTCCT CGCGGTGAGC CCCAGCTTGC TCCTGCCGTA CGTGCACGGC 
GATTCGCCCC AGATGCAACA GGGGCGGAAG TTCTTCCTGC GCGAGATCCG GCGCGGTGAA 
TACCGCGACG GTGCCGATGT CGAAGCCTTC GCGGACTTCT TCGTACGACA GCTCCATTCG 
CTCTTGCTCA CCCCGCTGGC GCCGGTCGCC GACGCGGTCG ACGAGCCCGG ACAGACCGGC 
CCGAGCTCGG CGAACCTGGA AGCAGGACGG CGCTACGCGG AGATGTTCGT GTTGCCCGCC 
AGGGCGCAAT TCGCCGAGTA G
 
Protein sequence
MAAPQTRPDT RAQILRAALD WVDEAGLTRI SMGALAKRAR LARATLYQHF TGKEALVDAV 
VASELDKFYS RIHDYADGIE DNRERLAAGF AYAYAYLREH RALQRVLAVS PSLLLPYVHG 
DSPQMQQGRK FFLREIRRGE YRDGADVEAF ADFFVRQLHS LLLTPLAPVA DAVDEPGQTG 
PSSANLEAGR RYAEMFVLPA RAQFAE