Gene Tpau_2049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2049 
Symbol 
ID9156204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp2134321 
End bp2135058 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003647000 
Protein GI296139757 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGAAA CGTCGACGTC GGTCGCCCCC GGAGCTGAGC TGCCCCGCTA CTTCCGCGCG 
AAGGTCGAGG TGCAGCGTAG GATCGCCCAG CTCGGCCACG GTGACACCCT TCCCGCCGAA 
CGCAGGCTCG CCGACGAACT CGGGGTCTCG CGGACCACCC TACGCAAGGC GCTCTCCGAG 
CTCTCGGCCG AGGGTATCCT GCGCCGCGAG CACGGTAGCG GTACCTACGT CGCCCCACCG 
AAGGTCGTCC GGGTGCGCCA GCTGACGTCA CTGAGCGAGG ATATCGGCGT CACCGGCAAG 
TCCGTCGAAT CGAAGGTCCT CGCGTGCGAA CACGTTCCCG CCGACGCCGA GACGCAGGCC 
GCGCTCGAAC TCGCCCGGGG AACCCGGGTG TACCGGGTGA CCCGGTTGCG GATCGTCGAC 
GAGGAGCCGT TGGCGATCGA ATGCGCTCAC CTGCGCGGTC CGCTGCGCGG TCTGGCGGAC 
CGGCTCGACT CCACCGCCTC ACTGTATCGC ACTCTGCGCG AACAGTACGG ACGCGACATC 
GTCGCCGTCG AGGACACCGT GGAGACGGCG CTCGCATCAC CGCACGAAGC CGAGCTGCTC 
GACATCCCGA ACGGCCACCC GCTGCTCATG GTTCACCGCC TGGGCCGCGA CGCCCAGGGC 
GCGCCACTGG AGTGGACTCG CAGCGTGTAC CGCGGCGACC GCTTCAAATT CGTCGCGCAC 
GCCACTGCCC AGCGGTGA
 
Protein sequence
MVETSTSVAP GAELPRYFRA KVEVQRRIAQ LGHGDTLPAE RRLADELGVS RTTLRKALSE 
LSAEGILRRE HGSGTYVAPP KVVRVRQLTS LSEDIGVTGK SVESKVLACE HVPADAETQA 
ALELARGTRV YRVTRLRIVD EEPLAIECAH LRGPLRGLAD RLDSTASLYR TLREQYGRDI 
VAVEDTVETA LASPHEAELL DIPNGHPLLM VHRLGRDAQG APLEWTRSVY RGDRFKFVAH 
ATAQR