Gene Tpau_2048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2048 
Symbol 
ID9156203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2132786 
End bp2134222 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content68% 
IMG OID 
Productsugar transporter 
Protein accessionYP_003646999 
Protein GI296139756 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGTA CGCAGGCTGC GAAGCCGGCC GCCGGTCTCG GCGTCATGGT CGGTGTCGCT 
GCGGCGAGTC TGGGCGTCAT CTACGGATAC GACACCTCGA ACATCGCCGC CGCGAAGGAC
TTCATCCGCG CCGACTTCGG CCTCGACGAC ACGATGACCC AGGCGCTCGC GACCGTCGTC
GTCGTCGGCG AGATCCTCGG TGCGATCGTC GGCGGCTGGT TCGCCAACAG GGTCGGCCGC
CGTACCGCGA TGATCTCCGT CGCCCTCGGA TACACCGTCT TCGCGCTGTT CGGTGCGCTC
GCGCCCACTG TGCCCCTCCT GCTCGTCGCC CGGTTCCTCC TGGGCCTCAC CGTGGGTGTC
TCCGTCGTCG TGGTCCCGGT GTTCGTAGCC GAGTCCGCGC CGCCGAAGCG CCGCGGCGCG
ATGCTGGTGG CCTACCAGTT CGCCACCATC GTCGGCATCA TCCTGGGCTA CGTCCTGGGC
TACCTGCTGG CCGATCTCGG TGCCGCCGCG TGGAAGTGGA TGCTCGGTGC GGCCGCGGTG
CCCGCTATCC TCGTCGCGCT GGTCCTGGTC CGCCTGCCCG ACACCGCGCG CTGGTACATG
ACTCGCGGCC GCGAGGACGA GGCCCGGGCC GCGCTCATCT CCGTGGAGCC GAGTTCGACT
GCCGCCGGAA TCGAAGCCGA ACTCGACGAG ATGCGCGCCC AGCTCTCCGA CGAGGCCGGC
GGTCGGCTCA GCCAGCTGTT CCGCCAGCCC TACCTGCGCG CCACCTTCTT CGTCGTCGTG
CTCGGCTTCT TCATCCAGAT CACCGGCATC AACGCGATCA TCTACTACAG CCCGGACATC
TTCGCCTCGA TGGGCTACGA GGGGAACTTC GGCAAGTACA TGTTGCCGGC CTTCGTCCAG
CTGTTCGGCC TTCTCGCGGT GGTCATCTCG ATCTTCACCG TGGACAAGTT CGGTCGGCGC
CCGATCCTCC TGGGCGGCAT CGGCACCATG ATCCTGGCGT TCGCGGTGAT GATCCTCGCG
TACCGCATGG CCGACGGGAA TTTCGCCGGC CACCAGAGCG CGGGCGTCGT CGGTTTCGCC
GGTCTGGTCC TGGTGGTGAT CGGGTTCTCG TTCGGATTCG GCTCGCTGGT CTGGGTGTAT
GCCGGGGAAG CCTTCCCCGC CCGGCTGCGC GCCTACGGCT CGTCGGCGAT GCTCACCTCG
GACCTGGTGG CCAACGCGAT CGTCGCACAG GTCACCCTGA CCATGCTCAA CAGTCGGCTG
CTCGGCGGCA CGGGCACGTT CGCGGTGTTC GGTGGGCTCA CGGTACTCGC GTTCTTGTTC
GTCCTGAAGT TCGCCCCGGA GACCAAGGGC CGCAAGCTCG AAGACATTCA ATACTACTGG
CAGAACGACG CCCAGTGGCC TGCCGCCGAC GCGCCGTCTC CGGCGGTGGC GCGATGA
 
Protein sequence
MSSTQAAKPA AGLGVMVGVA AASLGVIYGY DTSNIAAAKD FIRADFGLDD TMTQALATVV 
VVGEILGAIV GGWFANRVGR RTAMISVALG YTVFALFGAL APTVPLLLVA RFLLGLTVGV
SVVVVPVFVA ESAPPKRRGA MLVAYQFATI VGIILGYVLG YLLADLGAAA WKWMLGAAAV
PAILVALVLV RLPDTARWYM TRGREDEARA ALISVEPSST AAGIEAELDE MRAQLSDEAG
GRLSQLFRQP YLRATFFVVV LGFFIQITGI NAIIYYSPDI FASMGYEGNF GKYMLPAFVQ
LFGLLAVVIS IFTVDKFGRR PILLGGIGTM ILAFAVMILA YRMADGNFAG HQSAGVVGFA
GLVLVVIGFS FGFGSLVWVY AGEAFPARLR AYGSSAMLTS DLVANAIVAQ VTLTMLNSRL
LGGTGTFAVF GGLTVLAFLF VLKFAPETKG RKLEDIQYYW QNDAQWPAAD APSPAVAR