Gene Tpau_2015 details

Gene Information

• Locus tag: Tpau_2015
• ID: 9156170
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 2101721
• End bp: 2102407
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 64%
• Product: two component transcriptional regulator, winged helix family
• Protein accession: YP_003646966
• Protein GI: 296139723

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGAGG GCTCGCGGGT GATGGTCGTC GAAGACGATC CGGCAGTGCG GACGGTGGTC 
GCCGATCACC TGCGCCTGGC GGGTTGCTTG GTCTCACAGC ACCGTGACGG GGCGCGGGCC 
TGGGAGGCCT TCCAGGCTGA TCGGCCCGAC CTGTTGGTGC TCGATCGTAT GCTTCCGGGG 
CTCAGCGGCG ACGACCTATG CCGACGCGTC CGCGAGGTCT CCACGGTGCC GATCATCATG 
CTCACCGCTC TCGACGGTCT TGAGAACCGG ATCGACGGGC TGGAGAGCGG CGCGGACGAC 
TACCTTGCGA AACCCTTCTC GTTGCGTGAG CTCCAACTCC GGGTGAATGC TCAGCTGCGA 
CGTAATACTC CGTCGGAAGT CGACCTGGTG ATCGACGCCG GACCCTTCCG GATCGATGCC 
GCACATCGGC GGGTGTGGAT CGGCGATCGC GAGATCACTT TGACCACAAG GGAGTACGAG 
TTGATGCTCT ATCTGGTTCG CAATCCGGGC CGGGTGGTCA GTCGGGACGA GATCCTGCGC 
GAGGTGTGGC GGTGGGGATT CGGTGATGCG TCCACCGTGA CCGTGCACGT GCGGCGATTG 
CGCGAGAAGA TCGAAAGTGA TCCGCGAAAC CCGGTGTACT TACAGACGGA GTGGGGCGCG 
GGTTACCGAT TCGGTTGGGG CCGATGA 

 

Protein sequence

MQEGSRVMVV EDDPAVRTVV ADHLRLAGCL VSQHRDGARA WEAFQADRPD LLVLDRMLPG 
LSGDDLCRRV REVSTVPIIM LTALDGLENR IDGLESGADD YLAKPFSLRE LQLRVNAQLR 
RNTPSEVDLV IDAGPFRIDA AHRRVWIGDR EITLTTREYE LMLYLVRNPG RVVSRDEILR 
EVWRWGFGDA STVTVHVRRL REKIESDPRN PVYLQTEWGA GYRFGWGR