Gene Tpau_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1957 
Symbol 
ID9156112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp2043477 
End bp2044094 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003646908 
Protein GI296139665 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTCGC AGGATCTCAA CGAGGAGGTC GCGGCCCCGG CGCGGACCCC CGCGAACGCC 
ATCGACGACC AGACGATCCT CGATGCCGCA CGTGATCTGA TGACCACGAT CGGCATCCGG 
CGCACCACCA TGGCCGATGT CGCGCGCGCC GCTCAAGTGT CGCGCGCCAC ACTGTATCGG 
CGCTACCCCA ATGTCCAGGC TCTCGCGGCA ACCGTCACCA CACGCGAGTT CTCGGCAGCC 
CTCGCAACAC TCACCCCGGT CCCGGGCGAC GACACGCGCG AGAGCCTTGC GCGCACCGTC 
GTACACCTGA CCTCGTCCGC GCGGTCCCAC CCGTTGCTGC GCCGGATCAT CGAACTCGAT 
CCGGAGTTCT TGATCCCCTA CCTGCTGCAC CGCCAAGGCC GTACCTCGGC GAATCAGCTC 
GATACGCTCG AAGCGGCGGT CCGTGCCGGG CAGAACGACG GCAGCATCCG GTCGGGCGAT 
CCCCGTGAAC TGGCGTCCGT GGTACTCCAG GCCGCATGGT CATCCGCACT ATCCGGGCCC 
GTCTTCGCCG GGGCCGACGG CGGCGATCTA CTCGATTCCC AACTCTTCGA TCTCGTCGAG 
AGGTATCTGC GCCCGTGA
 
Protein sequence
MMSQDLNEEV AAPARTPANA IDDQTILDAA RDLMTTIGIR RTTMADVARA AQVSRATLYR 
RYPNVQALAA TVTTREFSAA LATLTPVPGD DTRESLARTV VHLTSSARSH PLLRRIIELD 
PEFLIPYLLH RQGRTSANQL DTLEAAVRAG QNDGSIRSGD PRELASVVLQ AAWSSALSGP 
VFAGADGGDL LDSQLFDLVE RYLRP