Gene Tpau_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1955 
Symbol 
ID9156110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2040746 
End bp2041924 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content67% 
IMG OID 
Productcobalamin synthesis protein P47K 
Protein accessionYP_003646906 
Protein GI296139663 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTG TTATCGTTAG TGGCATGGAA ACCGCAGCTC CCCTCCCTGT CACCGTCCTG 
TCCGGATTCC TCGGCGCCGG GAAGACCACC CTCCTCAACC ACCTGCTGAG CAACCGCGAG
GGCCGCCGCA TCGCCGTGAT CGTCAACGAC ATGAGCGAGG TCAACGTCGA CGCCTCCCTG
ATCGGGCTCG GCGGCTTCGA CCGCACGCAG GAGAAGCTCG TCGAGCTGAG CAACGGGTGC
ATATGCTGCA CCCTGCGCGA GGATCTGGTG GACGCCGTCG GAGCCATCGC CCGCCAGCGC
ACGCCCGACG GTGCGCCGCG CTTCGACCAC CTGGTGATCG AGTCGACCGG CATCTCCGAG
CCGATGCCCG TGGCGGCCAC CTTCGACTGG ACCTTCGACG ACGGCAGCCG GCTCGGCGAT
ATCGCAGTCC TCGACACGAT GGTGACGGTG GTCGACGCGA GCACCTTCCT CGGCGAGATC
GCGAAGGGGC ACAACCTCGC CCAGCGCGGG ATGGGCGCCG CTCCGGACGA CGAGCGCTCC
ATCGCCGACC TCCTCGTCGA TCAGGTCGAG TTCGCCGACG TGGTGTTGCT CAGCAAGCTG
GACCTGATCT CGGCCGCCGC GGGCGGCGCC GTCCAGGCCG CGGTGGGACG CCTGAATCCC
CGCGCGAAGA TCCTGCCGTT GCGCCACGGC GCACTCGAGC TCGCCGAGGT GATCGGTACC
GGGCTGTTCG ATCACGAAGC CGCCTCCGCG GTCGCTGGGT GGGACGACGA GGTTCTCGGC
GGGCACACTC CGGAGACGGA GGAGTACGGC ATCTCGTCGT TCGCTTACCG GTCCGACCGT
CCGTTTCATC CGCAGCGCCT CCTGGAATCA CTGAGCGAGG TCCGGGCGGT GCTGCGCAGC
AAGGGGTTCT GCTGGATCGC CAGCCGTCCA GATCTGGTGG CCGTGTGGTC GCAGGCAGGA
CCGAATCTCA CCATCGAGCC CGCGGCGTAC TGGTCGCACG TCGATGGCGT CCCGCAACAG
GAATTGGTGT TCATCGGGGT CAAGCTCGAC GCCGACCGCA TGCGGTCACT GCTCGACCGC
GCTCTGCTCA CCGACGCCGA GGTGGCCGAC GGGCCGGCTG CGTGGCGCGA CTACCCTGAT
CATCTGCCCG CGTGGAATGT GCCCGATCAC GTTCATTGA
 
Protein sequence
MKTVIVSGME TAAPLPVTVL SGFLGAGKTT LLNHLLSNRE GRRIAVIVND MSEVNVDASL 
IGLGGFDRTQ EKLVELSNGC ICCTLREDLV DAVGAIARQR TPDGAPRFDH LVIESTGISE
PMPVAATFDW TFDDGSRLGD IAVLDTMVTV VDASTFLGEI AKGHNLAQRG MGAAPDDERS
IADLLVDQVE FADVVLLSKL DLISAAAGGA VQAAVGRLNP RAKILPLRHG ALELAEVIGT
GLFDHEAASA VAGWDDEVLG GHTPETEEYG ISSFAYRSDR PFHPQRLLES LSEVRAVLRS
KGFCWIASRP DLVAVWSQAG PNLTIEPAAY WSHVDGVPQQ ELVFIGVKLD ADRMRSLLDR
ALLTDAEVAD GPAAWRDYPD HLPAWNVPDH VH