| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1945 |
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| Symbol | |
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| ID | 9156100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 2030530 |
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| End bp | 2032869 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_003646897 |
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| Protein GI | 296139654 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.712963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCTGC CGTCCCAGGG ATCCGACGCC GCGCGTACCC CCACGGCCGA GGCCGCTCCG
CAGCCGCCGA ATCTGGAGCA GACGGGGTCC ACCACCCGCC GGGTGCGGGC TCGGCTGGCA
CGCCGGATGA CGGGCACCCG CAATCACGTG CGGCCCGTGC TGGAACCCCT GGTCGCCCTC
CACCGCGAGG TGTACCCCAA GGCCGACGTG GCCCTCATCG AGCGCGCCTA CGACGTCGCT
GAGCAACGCC ACGCCACGCA GATGCGGAAG TCGGGCGATC CGTACATCAC CCATCCGCTC
GCCGTCGCCA CGATCCTCGC CGAGCTCGGC ATGGACACCA CCACCCTCGT CGCCGCGCTG
TTGCACGATA CGGTCGAGGA CACCGGATAC AGCTTGGACC AGCTGACCGC CGAATTCGGC
TCCGAGGTCG CGCACTTGGT CGACGGCGTC ACCAAGCTCG ACAAGGTGGC CCTCGGCAGT
GCGGCCGAGG CGGAGACGAT CCGCAAGATG ATCATCGCGA TGGCGCGGGA TCCGCGCGTG
CTGGTGATCA AGGTGGCGGA CCGTCTGCAC AACATGCGCA CGATGCGCTT CCTGCCTCCC
GAGAAACAGG CCCGCAAGGC TAAGGAGACA CTGGAAGTCA TTGCGCCGCT GGCGCATCGA
CTCGGCATGG CCACGGTGAA GTGGGAGTTG GAAGACCTTT CCTTCGCGAT CCTGCACCCG
AAGAAGTACG ACGAGATCGT GCGCCTGGTG GCCGATCGCG CACCGTCGCG CGATACCTAC
CTGGCGAGCG TGCGCGCCGA GATCAACGGC GCACTCACGG CGTCGCGGAT CGTCGCCGAT
GTGCAGGGGC GGCCGAAGCA CTACTGGTCG ATCTATCAGA AGATGATCGT CAAGGGCCGC
GACTTCGATG ACATCCACGA CCTGGTGGGC GTACGCATTC TGTGCGATGA GGTGCGGGAC
TGCTATGCCG CCGTCGGCGT GGTGCACTCG TTGTGGCAGC CCATGGCGGG CAGGTTCAAG
GACTACATCG CACAGCCCCG GTACGGCGTC TACCAGTCGC TGCACACCAC CGTCATCGGC
CCGGAGGGCA AGCCTCTGGA GGTGCAGATC CGCACCCGTG ACATGCACCG CACCGCCGAA
TTCGGTATCG CGGCGCACTG GCGCTACAAG GAGACCAAGG GCAAGGGCGG CAAGGGCGGT
TCCGATCTGT CCGAGGTCGA CGACATGGCC TGGATGCGGC AGCTCCTCGA CTGGCAGCGG
GAGGCCGCGG ATCCCGGAGA GTTCCTCGAA TCGCTGCGCT ACGACCTCGC CGTCAAGGAG
ATCTTCGTCT TCACCCCGAA GGGCGATGTG ATCAACCTGC CCGCCGGTAG CACCCCTGTG
GACTTCGCGT ACGCCGTGCA CACGGAGGTC GGTCACCGCT GTATCGGCGC CCGGGTGAAC
GGCCGGCTCG TGGCCCTGGA GCGCAAGCTG GAGAACGGCG AGGTGGTGGA GGTCTTCACC
TCCAAGGCCG AGAACGCCGG CCCGTCGCGC GATTGGCAGT CGTTCGTGGT GTCGCCACGC
GCGAAGGCGA AGATCCGGCA GTGGTTCGCC AAGGAGCGCC GTGAGGAGGC GCTCGAGAAC
GGTCGCGACG CGATCGCCAA GGAGGTGCGC CGCTCGGGCC TGCCGCTGCA GCGGCTCACC
AATGCCGAGT CGATGGCGGG CATCGCCAAG GAGTTGCGTT ACGCCGACGT CTCGGCGCTG
TACACGGCCG TCGGTGAGCA CCAGGTGTCC GCGCACACCG TGGTGCAGCG GATGCTGGAG
CAGCTCGGCG GCTTCGAGGA GGCGACGGAG GAGCTGGCCG AGCGCAGTAC CCCGTCCACC
CTGTCGGGGC CGTCGACACC GTCCACCGAT GTGGGCGTGC TCGTGACCGG TCAGCCGGGC
GTCCTCGCGA AGTTGGCCAA GTGCTGCACC CCGGTGCCGG GCGACGAGAT CGTCGGCTTC
GTCACCCGCG GCGGCGGCGT GAGTGTGCAT CGCACGGACT GCACCAACGT GGCGGAGCTG
CGGAAGGAGC CCGAGCGCTT CCTGGACGTG AAGTGGGCCC CGTCGCCGTC GTCGGTGTTC
CTGGTGGCGA TCCAGGTCGA GGCCCTCGAC CGGCATCGCC TGCTCTCGGA TGTCACCAAG
GTGCTGGCCG ACGAGAAGGT GAACATCCTG TCGGCATCGG TGACCACGTC TCGCGATCGG
GTCGCGGTGT CGCGCTTCAC CTTCGAGATG GGCGATCCGA AGCATCTCGG TCACGTACTG
AACGTGGTGC GCAATGTGGA GGGCGTCTAC GACGTCTACC GCGTGACCTC GGCCCAGTAG
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| Protein sequence | MSLPSQGSDA ARTPTAEAAP QPPNLEQTGS TTRRVRARLA RRMTGTRNHV RPVLEPLVAL
HREVYPKADV ALIERAYDVA EQRHATQMRK SGDPYITHPL AVATILAELG MDTTTLVAAL
LHDTVEDTGY SLDQLTAEFG SEVAHLVDGV TKLDKVALGS AAEAETIRKM IIAMARDPRV
LVIKVADRLH NMRTMRFLPP EKQARKAKET LEVIAPLAHR LGMATVKWEL EDLSFAILHP
KKYDEIVRLV ADRAPSRDTY LASVRAEING ALTASRIVAD VQGRPKHYWS IYQKMIVKGR
DFDDIHDLVG VRILCDEVRD CYAAVGVVHS LWQPMAGRFK DYIAQPRYGV YQSLHTTVIG
PEGKPLEVQI RTRDMHRTAE FGIAAHWRYK ETKGKGGKGG SDLSEVDDMA WMRQLLDWQR
EAADPGEFLE SLRYDLAVKE IFVFTPKGDV INLPAGSTPV DFAYAVHTEV GHRCIGARVN
GRLVALERKL ENGEVVEVFT SKAENAGPSR DWQSFVVSPR AKAKIRQWFA KERREEALEN
GRDAIAKEVR RSGLPLQRLT NAESMAGIAK ELRYADVSAL YTAVGEHQVS AHTVVQRMLE
QLGGFEEATE ELAERSTPST LSGPSTPSTD VGVLVTGQPG VLAKLAKCCT PVPGDEIVGF
VTRGGGVSVH RTDCTNVAEL RKEPERFLDV KWAPSPSSVF LVAIQVEALD RHRLLSDVTK
VLADEKVNIL SASVTTSRDR VAVSRFTFEM GDPKHLGHVL NVVRNVEGVY DVYRVTSAQ
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