| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1939 |
|---|
| Symbol | |
|---|
| ID | 9156094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 2023155 |
|---|
| End bp | 2024402 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_003646891 |
|---|
| Protein GI | 296139648 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.314426 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCG AGACCGCACC CGACGGTACG CGCTTGGCCG CGGCCGAATC CCGACATGCG
GCATCGCCCG CCGCCCCCGT CCTCGACATC GTGATCCCCG TGTACAACGA GGCGCACACC
ATCGCCCACT GCGTGGAGAC CTTGCACGCC TACCTCACCG ACACCCTGCG GGTCCCTGCG
CGCATCACCA TCGCCGACAA TGCGAGCACC GACGAAACCC TGCGCGTGTC CCACTCCCTG
GCGAGCGCCA TCGACGGAGT CCGCGTGGTG CACCTGGACG CGAAAGGCCG TGGCCGGGCG
CTGCGCCGAG TGTGGTCGGA GTCCGATGCG CAGGTGCTCG TGTACATGGA CGTCGACCTG
TCCACTGACC TCAACGCCCT GCTCCCGTTG GTCGCTCCCC TCATCTCCGG ACACAGCGAC
CTCGCGATCG GCACCCGGCT GGGCCGTGGT GCCCGAGTGC GACGGGGCCC CAAGCGGGAA
TTCATCTCCC GCGGCTACAA CGTGCTGTTG CACACCGCGC TGCGCGTGCG CTTCTCCGAC
GCCCAGTGCG GATTCAAGGC GATCCGCACC GACGTCGCGC GGGAGTTGCT ACCCCTGGTG
GAGGACGGTG AATGGTTCTT CGACACCGAA CTACTGGTGC TGGCGGAGCG CGCCGGACTG
CGCATCCACG AGGTCCCGGT CGATTGGACC GACGATCCGG ACAGCCGGGT CGACATCGTC
GATACCGTGG CCAAAGATCT GCGAGGCATG GCCCGTGTGG GTCGGGCGCT GGCGGCCGGG
CGGCTGCCAC TCGACGACGT ACGTCGTGCG GTCGGACGCG ACGAACCCCG GATCGCCGGC
GTGCCGCACG GGATGATCGG TCAGCTCGCC CGGTTCGCGG TCGTCGGTTT GGCGAGCACG
GTGGCCTACG CAGTGCTGTA TCTGGCGCTG CACTCGGCGA TCGGCGCACA GGCCGCGAAC
TTCGCAGCGC TCCTCATCAC CGCCGTGGGC AACATCGCCG CGAACCGCGC ATTCACCTTC
GGTGTGCGAG GCCGGCGCGG CGCGATGCGG CACCACACGC AGGGCCTGGT GGTCTTCCTC
GTCACGTGGG CACTCACCGC CGGAAGTCTG GCACTGCTGG CGACGGCGGC GCCCGCAGCA
TCCCGGGAGC TGCAGCTCGC GGTGCTGGTG ATCGCGAATC TGGTGGCGAC GGTGCTGCGC
TTCGTGGGCA TGCGGCTGAT CTTCCGGTCC CCCGGGGCCG CCCCGTGA
|
|---|
| Protein sequence | MTTETAPDGT RLAAAESRHA ASPAAPVLDI VIPVYNEAHT IAHCVETLHA YLTDTLRVPA
RITIADNAST DETLRVSHSL ASAIDGVRVV HLDAKGRGRA LRRVWSESDA QVLVYMDVDL
STDLNALLPL VAPLISGHSD LAIGTRLGRG ARVRRGPKRE FISRGYNVLL HTALRVRFSD
AQCGFKAIRT DVARELLPLV EDGEWFFDTE LLVLAERAGL RIHEVPVDWT DDPDSRVDIV
DTVAKDLRGM ARVGRALAAG RLPLDDVRRA VGRDEPRIAG VPHGMIGQLA RFAVVGLAST
VAYAVLYLAL HSAIGAQAAN FAALLITAVG NIAANRAFTF GVRGRRGAMR HHTQGLVVFL
VTWALTAGSL ALLATAAPAA SRELQLAVLV IANLVATVLR FVGMRLIFRS PGAAP
|
|---|
| |