Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1933 |
Symbol | |
ID | 9156088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 2016156 |
End bp | 2017859 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | VanW family protein |
Protein accession | YP_003646885 |
Protein GI | 296139642 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.416962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTCGGA CTCGAACCTC GCTGCGCCGT GCCTCCGCAC TCGCCGTAGT CGGGGCCCTG CTCCTCGGAG CGGGCGGAGC CGCGGTCTGG GAGAGCGGAC GCGCTGAAAC CGTCCACGGC GCCACGGCGC TGGGCGTGAA GTTCGGCGGC GTGAGCCGTG ACGAGGCGAT CAACCGGCTG CGCCCGGCGG CGCAGCAGGC AGCCACCGAG CAGGTCACGC TGCGCACGCC GAAGGGGTCG GTGCGGTTCA GCCCGGAACA GCTGGGCCTG ACGATGGATG TCGAGGGCAC CGTCGATCAG GCCATCCGCG ACCGAAATCC GGGTCGTGAC CTGATCGGGT ACGTCAAGCA GCGGCACGTG CACCCCGCCG CGAACATCGA CCGCGGTACG TTCGACGCCG CGCTCACGAA GTCGACGCCC GCGCTCACTT CGGCCGCGGG CGATGGCGCG GTGGTCTTCA AGGACGGCAA GCCGGTTCCC GTGCTGCCCA AGCCCGGCGA CAAGATCAAC TTCGATGAGG CGGCGAAGGC GGTGCTCGAA GCCTGGCCGG ACACCACCGA CATCGGTGTC CCCACCGAGA ACGTGCGCCC CACCGTCTCC GAGCAGATGG TCCGGTCGGT GGCCTCCGGT GCGGCGGCGC GCGCGGTCGC CTCACCCGTC GCACTGCGCA AAGACGGCGC ACCCAATGCC GACCCGACTA CTGTCGGCCG GCTCAGCGGT GACGACATCG GGACGTTCCT ATCGTTCCAG CCCGACGGCG AGGGGCAGCT CAAGCCCACG GTCGACCGTG ATGCCGCGCG CAAGGTTCTC GGTACGCGCC TCGAGTCGGC GGTGTCCAAG CCGAAGGACG CGTCCTTCTC GCTGTCCGGA GGGGCGCCGA CGATCACCGC GGCGGTACCC GGCAGCGAGG TGGTCTGGGA TCCGACCATC GACGCGGTCG CCAAGGCCGT CAACCAGCGC GACGACGCGA ACCGCGAAGC CACCGCGCAG TTCAAGACCG TAGAACCGAA GATCACCACC AAACGCGCGA ACGAACTCGG CGTCAAGGAG GTGGTGAGCG AGTTCTCCAC CGGTGGCTTC AGTGATGCCT CCGGTGTGAA CATCCGGCGG GTCGCACAGC AGGTCAACGG TGCGGTGATC CTGCCGGGAG AGACCTTCTC GCTCAACGGG TACACCGGGC CCCGCGGTAC CGCGCAGGGA TACGTGGAAT CGGGCATCAT CAACAACGGC CGCCCCGATA AGGCCGTCGG CGGCGGTATC TCACAGTTCG CGACCACGCT GTACAACGCC GCGTACTTCG CCGGGCTCGC CGACGCCGGC CACACCGAGC ACAGCTACTA CATCTCCCGG TACCCGGAGG CACGCGAGGC CACCGTCTTC GAGGGCTCGA TCGACCTGAA GTTCACCAAC GACACCCCGT ACGGCGTGGT GATCGAGTCG AGCGCCGGCT CGTCGTCGGT GTCGGTGCGG ATGTGGAGCA CCAAGACCCG GTCGGTCGAG TCCATCAAGG GCGAGCGCAG CGCATCCACC GAACCGTCGA CCATCCGTCT GCCGAAGGGC CCGCACTGCG TGGCCAGCAC CGGGCAGCCC GGCTTCACCA CCAGCAACAC CCGGGTGATC ACCGATGCCC GGACGGGGAA CCTGATCTCG CGGAACACCC GGACCGTGAA GTACGACCCG GTGCCCACCG TCATCTGCGA GTAG
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Protein sequence | MTRTRTSLRR ASALAVVGAL LLGAGGAAVW ESGRAETVHG ATALGVKFGG VSRDEAINRL RPAAQQAATE QVTLRTPKGS VRFSPEQLGL TMDVEGTVDQ AIRDRNPGRD LIGYVKQRHV HPAANIDRGT FDAALTKSTP ALTSAAGDGA VVFKDGKPVP VLPKPGDKIN FDEAAKAVLE AWPDTTDIGV PTENVRPTVS EQMVRSVASG AAARAVASPV ALRKDGAPNA DPTTVGRLSG DDIGTFLSFQ PDGEGQLKPT VDRDAARKVL GTRLESAVSK PKDASFSLSG GAPTITAAVP GSEVVWDPTI DAVAKAVNQR DDANREATAQ FKTVEPKITT KRANELGVKE VVSEFSTGGF SDASGVNIRR VAQQVNGAVI LPGETFSLNG YTGPRGTAQG YVESGIINNG RPDKAVGGGI SQFATTLYNA AYFAGLADAG HTEHSYYISR YPEAREATVF EGSIDLKFTN DTPYGVVIES SAGSSSVSVR MWSTKTRSVE SIKGERSAST EPSTIRLPKG PHCVASTGQP GFTTSNTRVI TDARTGNLIS RNTRTVKYDP VPTVICE
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