Gene Tpau_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1874 
Symbol 
ID9156024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp1961286 
End bp1961927 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content70% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003646826 
Protein GI296139583 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.635222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGTCA CCGTGGTCCT GGCCGACGAT CACGCCGCGA TCCGAGCGGG CCTGCGTCTG 
CTGCTCGAGT CGTCCGGTGA GGTGGAGGTG ATCGGAGAGG CGGCCGACGG GGCCGCCGCC 
CTGCGGCAGG CGAAGGCGTT GCGGCCCGAT GTGGTGATCA TGGACGTACG GATGCCGCGA 
GTGGACGGCA TCGCCGCGAC CGCGCATGTG GTGGCGGAGA CCGATGCGGC CGTGCTGGTG 
CTCACCACCT TCGATCTGGA CGACTACGTC CTGGGCGCGC TCGCGGCGGG AGCGAGCGGC 
TTCCTGCTCA AGTCCGCGGG CGGCGACGAG CTGATCCGCG GCGTGCAGGC GGTTGCCGCC 
GGCGATGCGG TGCTCGACCC GAAGGTCACC CGCGCTGTGA TCACCTCCCT GCCTGCGCCA 
CCGACTGCGG TGCACCCGGA CCTGTCCTCA CTCACCGGCC GGGAGCGAGA TGTATTGGCG 
GGGCTGGGCG CCGGCCTGTC GAACTATCAG ATCGCACGCC GACTCGAGAT CGGCGAGGCA 
ACCGTGAAGA CACACGTCTC GCGGGTGCTG ATGAAGCTCG GTGTGCAGTC CCGGGTGCAG 
GCCGCGGTGA TCGCGGCGCA GTCGGGCCTC GAAGCACCGT GA
 
Protein sequence
MTVTVVLADD HAAIRAGLRL LLESSGEVEV IGEAADGAAA LRQAKALRPD VVIMDVRMPR 
VDGIAATAHV VAETDAAVLV LTTFDLDDYV LGALAAGASG FLLKSAGGDE LIRGVQAVAA 
GDAVLDPKVT RAVITSLPAP PTAVHPDLSS LTGRERDVLA GLGAGLSNYQ IARRLEIGEA 
TVKTHVSRVL MKLGVQSRVQ AAVIAAQSGL EAP