Gene Tpau_1828 details

Gene Information

• Locus tag: Tpau_1828
• ID: 9155978
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 1908778
• End bp: 1910730
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 66%
• Product: hypothetical protein
• Protein accession: YP_003646785
• Protein GI: 296139542

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTACCGCG TGATTGGCCT ACCCCGGTTC TCGGACCGCA CCCGCGACTG GTTCCTCAGC 
GGCATGTCCG AACGCGCCGG CACCCACGTC GGCCCGCACG CCTCGGACAG CGATCATCCG 
CAGCCGTGGT GGAAGGTCAT GTGTCTGACC GGCGTCGACT ATTTCTCCAC GCTGGGCTAC 
CAGCCGGCCA TCGCCTTCAT CGCCGCCGGC GTCATCTCCC CCATCGCCAC CCTGGTGCTC 
ATCGCGCTCA CTCTGCTCGG CGCGCTCCCG GTGTACAAGC GTGTGGCCCG CGAGAGCCCG 
AACGGGGCGG GGTCGCTCGC CATGTTCGAG CGGCTGCTGC CCTGGTGGGG CGGCAAGCTG 
TTCGTTCTCG TACTGCTGGG ATTCGCCGCC ACCGACTTCA TCATCACCAT CACGCTCTCG 
TCGTCGGACG CCGCCGAGCA CATCGTCGAG AACCCGTTGG CGCCACAGTT CCTCCAGGGC 
GCGAACATCC CGATCACCCT GCTGTTGGTA CTGGCACTGG GTCTGGTGTT CCTCAAGGGC 
TTCCGGGAGG CCATCGGCAC CGCGGTGCTC CTGGTCACGG TGTACCTCTC ACTCAACGTG 
GTCGTGATCC TGGTGTCGCT GTGGCACATC GTCGAACGAC CGCAGTTCGT GCTGGACTGG 
CAGAACCTGC TGTGGGCCGA GAACTCGAAT CCGCTGATGG TGGTGGCGGT CGCTCTGATC 
GTGTTCCCGA AACTCGCGCT CGGCCTGTCC GGCTTCGAGA CCGGTGTCGC CGTGATGCCT 
CAGATCAAGG GCGATCCCAA CGACCCGCCC GAATACCCGG CCAAGCGAAT CCGGGACACC 
GGGCGGCTGC TCACCACCGC CGCGGTGATC ATGAGCGTGC TGCTCGCGAC GTCGAGCTTC 
GCGACCACGC TGCTGATTCC CGCGGAGGAG TTCGGTCCGG AGGGAGCGGC GAACGGTCGC 
GCGCTGGCCT ACCTCGCGCA CGACTACCTG GGCAACACCT TCGGCACCGT GTACGACATC 
TCGACCGTGG CGATCCTGTG GTTCGCGGGG GCGTCCGCGA TGGCGGGCCT GCTCAACCTG 
GTGCCCCGCT ACCTGCCCCG ATACGGCATG GCCCCGCGCT GGGCCTCGGC GGTACGCCCC 
CTGGTCGTCG TGCTCACCGT GATCGCACTG GTGATCGTGC TGATCTTCGA GGCGGACGTG 
AATGCGCAGG GCGGCGCGTA TGCGACCGGT GTGTTGGTGT TGATGACCTC CGCCGCGGTG 
GCCGTCACGA TCTCCGCGCG ACGCAAACGG CAGACCGCAC AAACCTGGAT GTTCGGTCTC 
ATCGCGGCCG TGTTCGTGTA CACCACCATC GACAACATCA TCGAGCGGCC CGATGGCGTG 
CGGATCGCCG CGCTGTTCAT CCTGGCGATC GCCGTGGTGT CGATCGGCTC CCGCGTGCGG 
CGCTCGTTCG AGCTGCGCGC ATCGTCGATC AGCTTCGACG ACAAGGCCCT GGAATTCATC 
CGCGACGACG CGCAGGCCCA GCACGCGATC CGCATCGTGG CCCACGAGCC CGACGTGGAC 
ACCAAGAAGG AGTACCGGGA CAAGGTACGC GCCGAGCGCA AATTCGGGCA CATCCCCGGC 
CGGTCCCGGG TGATCCTGCT CGAAGTGTGG CCGCGGGACT CGTCGGACTT CGAGCAGGAT 
CTCGAGGTGC GCGGCATCGA GAAATTCGGA TACCGCCTGC TCAAGGTGCG CTCGGGCAAC 
ATCGCCAACA CGATTGCGGC GGTGCTGCTC TACATCCGCG ACGAGACGGG CGTGGTGCCC 
GAGGTCTATT TCCAGTGGTC CGAGATGAAT CCCGTGCTCA ACATGGGCAA GTATCTCGTC 
GAGGGCACGG GCGAGGTGGC CGCGGTCTGT CACGAGGTGC TCCGGCAGGC CGAGCACGAC 
GCGAAGCGCC GACCGACGGT CCACGTGTCC TGA 

 

Protein sequence

MYRVIGLPRF SDRTRDWFLS GMSERAGTHV GPHASDSDHP QPWWKVMCLT GVDYFSTLGY 
QPAIAFIAAG VISPIATLVL IALTLLGALP VYKRVARESP NGAGSLAMFE RLLPWWGGKL 
FVLVLLGFAA TDFIITITLS SSDAAEHIVE NPLAPQFLQG ANIPITLLLV LALGLVFLKG 
FREAIGTAVL LVTVYLSLNV VVILVSLWHI VERPQFVLDW QNLLWAENSN PLMVVAVALI 
VFPKLALGLS GFETGVAVMP QIKGDPNDPP EYPAKRIRDT GRLLTTAAVI MSVLLATSSF 
ATTLLIPAEE FGPEGAANGR ALAYLAHDYL GNTFGTVYDI STVAILWFAG ASAMAGLLNL 
VPRYLPRYGM APRWASAVRP LVVVLTVIAL VIVLIFEADV NAQGGAYATG VLVLMTSAAV 
AVTISARRKR QTAQTWMFGL IAAVFVYTTI DNIIERPDGV RIAALFILAI AVVSIGSRVR 
RSFELRASSI SFDDKALEFI RDDAQAQHAI RIVAHEPDVD TKKEYRDKVR AERKFGHIPG 
RSRVILLEVW PRDSSDFEQD LEVRGIEKFG YRLLKVRSGN IANTIAAVLL YIRDETGVVP 
EVYFQWSEMN PVLNMGKYLV EGTGEVAAVC HEVLRQAEHD AKRRPTVHVS