Gene Tpau_1817 details

Gene Information

• Locus tag: Tpau_1817
• ID: 9155967
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1898306
• End bp: 1898875
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 69%
• Product: isochorismatase hydrolase
• Protein accession: YP_003646774
• Protein GI: 296139531

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTTCG ATCGTCCGGT ACTGCTTCTC ATGGACTTCC AGCGTGGCAT CGTCGACGGT 
GCCGAACGCG CCGGAGCGAC GGCACTAGGC AATGCCGAGC GGGCACTCAG TGCCGCCCGC 
GACCACGGCC TGCCCGTGGT GCACGTGCGC GTGGCGTTCC GTCCGGACTA TCCCGAGATC 
TCTCCGAACA ACCAGGCCTT CGCCCCGATC CGGGAGGGCG GCGACTCGAT GACCGAGGCT 
TCGCCCCTCA CCGCCATCGT CACCGAGGTT GCGCCCCTTC CGGGCGAGCC GGTGGTGACC 
AAGCGCAGGT TCGGCGCGTT CAGCGGGAGC GATCTCGACG CCGTGCTGCG CGGGCTCCGT 
GCCGATGGGC TCGTGCTCGC GGGCATCAGC ACCAGCGGTG TGGTGCTCTC CACCGTGCGC 
TACGCCGCCG ATCTCGACTA CCGGCTGACC GTGCTGTTCG ATGCGTGCGC CGACCATGAC 
CCCGAGGTGC ACCGGGTGCT CATGCGCAAG GTGTTCCCGC GGCAGGCCGA GGTCGTCACC 
GTCGACGAAT GGGTCGACGC GCTGGCCTAG 

 

Protein sequence

MAFDRPVLLL MDFQRGIVDG AERAGATALG NAERALSAAR DHGLPVVHVR VAFRPDYPEI 
SPNNQAFAPI REGGDSMTEA SPLTAIVTEV APLPGEPVVT KRRFGAFSGS DLDAVLRGLR 
ADGLVLAGIS TSGVVLSTVR YAADLDYRLT VLFDACADHD PEVHRVLMRK VFPRQAEVVT 
VDEWVDALA