Gene Tpau_1814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1814 
Symbol 
ID9155964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1894908 
End bp1896545 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content65% 
IMG OID 
ProductSSS sodium solute transporter superfamily 
Protein accessionYP_003646771 
Protein GI296139528 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCAC TCCTCGCGGG GTACGAGCCG AGGACCATCG AGCCGGGCCA GCAGATCGGC 
TCCACCACCC TCAATATCGT CATCTTCCTG CTGTTCATCG GCGTCACCAT GGGCCTGGTG
ATCCGGGCCA GCCGCACCAC CAAGAAGGCC ACCGACTTCT ACACCGGCGG AGCCTCGTTC
ACGGGCCCGC AGAACGGCTT CGCCATCGCC GGTGACTACC TCTCCGCGGC CAGTTTCCTG
GGCATCTGCG GCGCCATCGC GATCCAGGGC TACGACGGCT TCCTCTACTC GATCGGATTC
CTCGTGGCCT GGCTCGTCGC GCTGCTGCTC GTGGCCGAGC GGCTGCGTAA CGTCGGCAAG
TTCACGATGG CCGATGTGCT CAGCTTCCGA TTGCGGCAGC GTCCCGTGCG GATGGCGGCC
GCCCTGGCCA CGCTCACCGT GTCGCTGTTC TATCTGATCG CTCAGATGGC GGGTGCGGGT
GGCCTGGTGT CGCTGTTGCT CAACATCAAG GGGACCACCG GACAGGCCGT GGTGGTCGCC
GTCGTCGGCA TCCTGATGAT TGTGTACGTG CTGGTGGGCG GTATGAAGGG CACCACCTAC
GTGCAGATGG TCAAGGCCGT CCTGCTGGTC GGCGGCGCGC TGCTCATGAC GCTCATGGTG
CTCGCGGCGG TGAAGGGCAA CTTCTCCGAT CTGTTGCAGA AGGCCATCGA CGGCAGTGCC
TCGGGGCAGA AGATCATCGA GCCCGGCCTC AAATACGGCA AGACCGAGAC CACCAAGCTC
GACTTCATCT CCCTGGCACT GGCGCTGGTG CTCGGCACAG CAGGCCTGCC GCACGTGCTG
ATGCGCTTCT ACACCGTGCC TACCGCCAAG GAGGCGCGGC GCTCCGTCAC CTGGGCCATC
GGCCTGATCG GCGCCTTCTA CATCTTCACC CTGGTGCTGG GTTTCGGTGC CGCGGCCTAC
GTCGGCTCCG ATGTGATCAC CACGGCACCG GGCGGCGTGA ACTCGGCGGC ACCGCTGCTC
GCGTTCTCAC TGGGGGGCAC GATCCTCATG GCGGTGATCT CGGCGGTCGC GTTCGCCACG
ATCCTCGCCG TCGTCGCCGG CCTCGCGATC ACCGCGTCGG CAAGTCTCGC GCACGACATC
TACAACGGCG TCATCAAGCA CGGCCAGGCC ACGCCCGAGT CGCAGGTGCG GGTCTCTCGG
ATCACCGTGG TGGTGATCGG CATCGTCTCG ATCATCCTGG GCATCGGCGC GATGGGGCAG
AACATCGCCT TCCTGGTGGC TCTGGCCTTC GCGGTGGCGG CCTCGGCCAA TCTGCCCACG
ATCCTGTTCT CCCTGTTCTG GCGCCGCTTC AACACCACCG GAGCGCTGCT GTCGATGTAC
GGCGGCCTGA TCTCCGCGAT CGGCCTGATC ATCTTCTCGC CGGCCGTGTC CGGGAAATCG
ACCTCGATGT TCAAGAACGC CGACTTCGCC TGGTTCCCGC TGGAGAATCC GGGCCTGGTG
TCCATCCCGA TCGGCTTCGG TCTCGCGATC CTGGGCACGA TCTTCGGCAA ACCCGATACC
GACCTCGCCG ATAAGGCCGT TGAGATGGAG GTGCGATCAC TGACCGGCGT CGGCGTGGAG
AAGGCGATCG ATCACTGA
 
Protein sequence
MTALLAGYEP RTIEPGQQIG STTLNIVIFL LFIGVTMGLV IRASRTTKKA TDFYTGGASF 
TGPQNGFAIA GDYLSAASFL GICGAIAIQG YDGFLYSIGF LVAWLVALLL VAERLRNVGK
FTMADVLSFR LRQRPVRMAA ALATLTVSLF YLIAQMAGAG GLVSLLLNIK GTTGQAVVVA
VVGILMIVYV LVGGMKGTTY VQMVKAVLLV GGALLMTLMV LAAVKGNFSD LLQKAIDGSA
SGQKIIEPGL KYGKTETTKL DFISLALALV LGTAGLPHVL MRFYTVPTAK EARRSVTWAI
GLIGAFYIFT LVLGFGAAAY VGSDVITTAP GGVNSAAPLL AFSLGGTILM AVISAVAFAT
ILAVVAGLAI TASASLAHDI YNGVIKHGQA TPESQVRVSR ITVVVIGIVS IILGIGAMGQ
NIAFLVALAF AVAASANLPT ILFSLFWRRF NTTGALLSMY GGLISAIGLI IFSPAVSGKS
TSMFKNADFA WFPLENPGLV SIPIGFGLAI LGTIFGKPDT DLADKAVEME VRSLTGVGVE
KAIDH