| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1738 |
|---|
| Symbol | |
|---|
| ID | 9155888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 1812311 |
|---|
| End bp | 1814563 |
|---|
| Gene Length | 2253 bp |
|---|
| Protein Length | 750 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | polyribonucleotide nucleotidyltransferase |
|---|
| Protein accession | YP_003646695 |
|---|
| Protein GI | 296139452 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACA ACACTCAGGT CGAGTTCGAC GACGACATCA CCGAAGCGGT GGCCGTCATC
GACAACGGCT CCTTCGGCAC GCGCACGATC CGGTTCGAGA CCGGTCGGTT CGCGCAGCAG
GCCGCCGGCT CGGTGGCCGC CTACCTCGAC GACGAGACGA TGCTGCTCTC GGCCACGTCG
CACAGCAAGC ACCCGAAGGA GCACTTCGAC TTCTTCCCGC TGACCGTCGA CGTCGAGGAG
CGCATGTACG CCGCGGGCCG CATCCCCGGC TCGTTCTTCC GTCGCGAGGG TCGCCCGTCG
ACCGACGCGA TCCTCACCTG CCGCCTGATC GACCGGCCGC TGCGCCCGTC GTTCGTCGAC
GGCCTCCGCA ACGAGATTCA GGTCGTCGTG ACCGTCATGT CGCTCGATCC CAAGGATCTG
TACGACGTGG TCGCGATCAA CGCCGCCTCG GCGTCGACCC AGATCGCCGG CCTGCCCTTC
TCCGGTCCCG TCGGCGGCGT GCGCGTCGCC CTCATCGACG GCCAGTGGGT CGCCTTCCCG
ACCGTCGAGC AGCTCGAGCG CGCCGTCTTC GACATGGTCG TCGCGGGTCG CATCGTCTCG
GGCTCCGGCA AGGACGCCGA CGTCGCGATC ATGATGGTCG AGGCCGAGGC CACCGAGAAC
GTTATCGAGC TCATCGCGGG CGGCGCCACC GCGCCCACCG AGGCCGTCGT GGCCGAGGGC
CTCGAGGCCG CCAAGCCCTT CATCGCCGTG CTGTGCGAGG CGCAGAAGCA GCTGGCCGCT
GGTGCGGCCA AGCCGACCGG CGAGTTCCCG CTGTTCCCCG CCTACCAGGA CGACGTCTTC
GCCGCCGTCG AGGCCGCGGG TGCCGCGAAG CTCAACGATG CGCTGTCGAT CGCCGGCAAG
CAGGAGCGCG ATAACGCCAC CGACGTCGTC AAGGCCGAGG TGCTTGAGGC CGTGGGCCCG
CAGTTCGAGG GCCGCGAGGG CGAGATCGGC GCGGCCTTCC GCTCGCTGAC CAAGAAGCTG
GTGCGCCAGC GCATCCTCAC CGACCACTTC CGCATCGACG GCCGTGGCAT CACCGACATC
CGCTCGCTCA GCGCCGAGAT CGCCGTGATC CCGCGCGCCC ACGGCAGTGC GCTGTTCGAG
CGTGGCGAGA CCCAGATCCT GGGCGTCACC ACGCTGGACA TGGTGAAGAT GGCACAGCAG
ATCGACTCGC TCGGACCCGA GAAGTCCAAG CGCTACATGC ACCACTACAA CTTCCCGCCG
TACTCGACCG GTGAGACCGG CCGTGTCGGC TCGCCGAAGC GCCGCGAGAT CGGCCACGGC
GCCCTCGCCG AGCGCGCCCT CGTGCCGGTA CTGCCCTCGG TGGAGGAGTT CCCCTACGCC
ATCCGTCAGG TCTCGGAGGC GCTGAGTTCC AACGGCTCCA CCTCGATGGG TTCGGTCTGC
GCCTCGACGA TGTCGCTGCT CAACGCCGGT GTGCCGCTCA AGGCGCCCGT CGCGGGCATC
GCCATGGGAC TGGTGTCCGA TGAGGTCGAC GGCCAGGCCC GCTACGTGGC CCTGACCGAC
ATCCTCGGCG CCGAGGACGC CTTCGGCGAT ATGGACTTCA AGGTCGCCGG CACGTCCGAC
TTCGTCACCG CCCTGCAGCT CGACACCAAG CTGGACGGCA TCCCGTCGCA GGTCCTGGCC
GGCGCGCTCG GCCAGGCGAA GGATGCCCGG ACCACGATCC TCGAGGTCAT GGCCGAGGCG
ATCGACGCCC CCGACGAGAT GAGCCCGTAC GCCCCGCGGA TCACCACCAT CAAGGTGCCC
GTGGACAAGA TCGGCGAGGT CATCGGACCC AAGGGTAAGA CGATCAACTC CATCACCGAG
GAGACCGGCG CCAACATCTC GATCGAGGAT GACGGCACGG TGTTCGTCGG TGCGGCCGAC
GGCCCGTCGG CCCAGGCGGC GATCGACCGG ATCAACGCCA TCGCCAACCC GCAGCTGCCG
AAGGTGGGCG AGCGCTTCCT GGGCACCGTG GTCAAGACCA CGGCGTTCGG CGCCTTCGTC
TCGCTGGTCC CCGGCCGCGA CGGTTTGGTG CACATCAGCA AGCTGGGTAA CGGCAAGCGC
GTGAACAAGG TCGAGGATGT GGTCAACGTC GGCAGCAAGC TGCAGGTGGA GATCGCCGAT
ATCGACGAGC GCGGCAAGAT CAGCCTGATC CCCGTGGTCG AGGACGATAA GGCGGCCGAG
CCCGTTCCCG CCGCCGCGGC GACCGAGGAG TAG
|
|---|
| Protein sequence | MSDNTQVEFD DDITEAVAVI DNGSFGTRTI RFETGRFAQQ AAGSVAAYLD DETMLLSATS
HSKHPKEHFD FFPLTVDVEE RMYAAGRIPG SFFRREGRPS TDAILTCRLI DRPLRPSFVD
GLRNEIQVVV TVMSLDPKDL YDVVAINAAS ASTQIAGLPF SGPVGGVRVA LIDGQWVAFP
TVEQLERAVF DMVVAGRIVS GSGKDADVAI MMVEAEATEN VIELIAGGAT APTEAVVAEG
LEAAKPFIAV LCEAQKQLAA GAAKPTGEFP LFPAYQDDVF AAVEAAGAAK LNDALSIAGK
QERDNATDVV KAEVLEAVGP QFEGREGEIG AAFRSLTKKL VRQRILTDHF RIDGRGITDI
RSLSAEIAVI PRAHGSALFE RGETQILGVT TLDMVKMAQQ IDSLGPEKSK RYMHHYNFPP
YSTGETGRVG SPKRREIGHG ALAERALVPV LPSVEEFPYA IRQVSEALSS NGSTSMGSVC
ASTMSLLNAG VPLKAPVAGI AMGLVSDEVD GQARYVALTD ILGAEDAFGD MDFKVAGTSD
FVTALQLDTK LDGIPSQVLA GALGQAKDAR TTILEVMAEA IDAPDEMSPY APRITTIKVP
VDKIGEVIGP KGKTINSITE ETGANISIED DGTVFVGAAD GPSAQAAIDR INAIANPQLP
KVGERFLGTV VKTTAFGAFV SLVPGRDGLV HISKLGNGKR VNKVEDVVNV GSKLQVEIAD
IDERGKISLI PVVEDDKAAE PVPAAAATEE
|
|---|
| |