| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1708 |
|---|
| Symbol | |
|---|
| ID | 9155858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 1782713 |
|---|
| End bp | 1784272 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | HNH endonuclease |
|---|
| Protein accession | YP_003646665 |
|---|
| Protein GI | 296139422 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0664589 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATGGTT CGAATATCGC CGAGGCGGAA CAGGCCTCCG ACTATGAGCC GTTCTGGCGC
GATTTCTCCG CCTTCGATCG CACCTCCGTC GTCGAGCTGA TCGACGAGTC AACGCGGATC
ATCAACCACG AGGTAGCGCG GCGGTGCGCC TGGATCGCGA CGCGACACGA CCAGATTTAC
GCCGAATGGG CTGATTCATC GGCTGTTCTG GGGCCGGAAG GTGACTGTCG GGCCGGGTTC
ACCGATGAGT TCGATCAGCT GGTCGGAGAG GTCGGCGCGG TGATCGGTCG CGGCGCCGGC
GCAGCCCGTG CCTTGATCGA GCTGAGTCTC GCGCTGCGCG ACCGCACCCC ACTGGTGTTC
GACATGCTCT ACGAGGGCAG GATCGGCGAG ACCATCGCCC GCGCCGTCGT CACCCGCGCC
GCGGCGATCA CGGATCCGGC CGTGATGCAT AGCTACGACC AGGCCGTCTC CGGGCTCCTC
GGCTGCAAGC TGGCCCGCGG GCGGGCCGTG GTCTCGGAGA GCGCCGCTCG CCGACTTGCC
GACGGCGTGC TCGCCACGAT CGATCCCGAT GCTGTGCCGG TTCCGGCGAG TGCTCGGCGG
CGCGGGGTGT GGTTCGACGT TCGCCGTGAC GGGCTGACCG AGATGGCCGC AGTCTTGTTC
TGTGAGGACG GGGCCTACCT GGATCGCGAG GTCGAGCGCA TCGCCACCAC GGTGTGCGGC
AAGGATCCGC GGAGTCTGGG CGAACGGCGG GCCGATGGTC TGGTTGCCTT GGTGCAGGGC
TACGAGACAC TGGGGTGCCG CTGCGAATCG GACGGTTGCG AGGTGCAGGC GCAGGTGCTG
AAACATGCTG CTGTCGAGGC GAAGACGGTG GCCGATGTGA CTGTGGTGCT CAACGAATCC
ACCGTGGCCG GCGCAGATGA TGCGCCCGCG CTGATCGGTG GGCAGCCGGT TCCCGCCGCC
CTGGCGCGCG AGGTGATCGC TCGCGTCGGC GAGGCCCGAT TCCGCTCGCT CGGGAAGCCT
ACGGGTGCGC GGGTGTGCGC CCACGACGTT GCAGGCTACC GCCCCTCGGC ATTGCAGGCT
GACTTCCTCA AGATCCGCTA CCCGGAGTGC GTGTTTCCCG GCTGCGCCGT GCGATTCGAC
GCGTGCCAGC TCGATCACGT CACCGAATGG AACCATCGCG ACCACGCCGT GGGCGGGAAG
ACGCGGATCG GGAACCTCGT TCCGCTGTGT CCGCGACATC ATCGGCTCAA GACCGAGCAG
AACTGGCTTT CCGATGTGCT CCCCGGTGGA GAAGTGGAGT GGCACACGCC CACCGGACAC
GTCTACCGCA CGGCTGTGGT CACCGGCGAC GATCTGTTCC CCGACCTGGA CCTGATCGAA
TGGCTCGCAC CAGTACGACG CCTGAAACCC GCGGTGCCCC GCTCGAATGG TCCCACTCGG
GTGGAGCTGC GTAACGCTGG GCGTGAGGCT CGGCGCGAGA AGTACCGCCG TGCACGGGAG
ACGCTGCGCG ACGAACATCC CGGCGATCCG CGCTGGAACG ATGAGCCGCC GCCCTACTGA
|
|---|
| Protein sequence | MHGSNIAEAE QASDYEPFWR DFSAFDRTSV VELIDESTRI INHEVARRCA WIATRHDQIY
AEWADSSAVL GPEGDCRAGF TDEFDQLVGE VGAVIGRGAG AARALIELSL ALRDRTPLVF
DMLYEGRIGE TIARAVVTRA AAITDPAVMH SYDQAVSGLL GCKLARGRAV VSESAARRLA
DGVLATIDPD AVPVPASARR RGVWFDVRRD GLTEMAAVLF CEDGAYLDRE VERIATTVCG
KDPRSLGERR ADGLVALVQG YETLGCRCES DGCEVQAQVL KHAAVEAKTV ADVTVVLNES
TVAGADDAPA LIGGQPVPAA LAREVIARVG EARFRSLGKP TGARVCAHDV AGYRPSALQA
DFLKIRYPEC VFPGCAVRFD ACQLDHVTEW NHRDHAVGGK TRIGNLVPLC PRHHRLKTEQ
NWLSDVLPGG EVEWHTPTGH VYRTAVVTGD DLFPDLDLIE WLAPVRRLKP AVPRSNGPTR
VELRNAGREA RREKYRRARE TLRDEHPGDP RWNDEPPPY
|
|---|
| |