Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1704 |
Symbol | |
ID | 9155854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 1775450 |
End bp | 1777723 |
Gene Length | 2274 bp |
Protein Length | 757 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_003646661 |
Protein GI | 296139418 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACCCG GAGCCCCGGC GCAGACGTAC CGCGTCAAGG GCAGCGCTCT CGGAGTCGCC ATCGTGGTCC TGTCCGGCAT GATGTTCCTC GCTGTCCTGG ACGGCACCGT GGTCTTCATC GCGATGCCGA GCATCCAGGA TGCGATGCAT CTGTCCGACG CCGCGAAGAT CTGGGTGTTC GGCGCCTACG TCCTCACCTT CGGCGGATTC ATGCTGTTGG GCGGGCGGCT CGGCGACACG TTCGGCCGAA AACGGATGTT CATCGTCGGC GTGGCCGGGT TCACCCTCGC CTCGCTGCTG ACCGGCTTCG CCAGCAACGA GGTGTGGCTG CTGGCCGCGC GCGCGGGCCA GGGCCTGTTC GCCGCCATCG CGTGCCCCAC TGCGCTGGCC CTCATCGCGA CCACCTTCGC GCCCGGCAAG GCACGCAACC AGGCGTTCGC GATCTTCGGT GCGATGGCGG GGCTCGGATC GGTCGCGGGC CTGGTGGCGG GTGGCCTGCT GGCCACGATC GACTGGCGAC TGGTGTTCTG GATCAACATC CCGGTCGGCG TCGTCTGCGT GATCGGCGCG ATCGTCGCGC TCGAGGAGTC CACCGCCGAG CGTCGTCACT CGCTCGACGT CAAGGGGGCG TTCCTCGCGG TCACCGGCTG CGTCGCCGGC GTCTACGCCC TGACCATGGG GCCCGAGGTG CACTGGCAGA GCCCGTCGGT CTACATCGCC GCCGTCGTGT GCGTCGTCTC CCTCGCTGTG TTCTTGCAGG TCGAGCGCAC TGCGAAGAAC CCGATCCTGC CGTTCTCGCT GTTCCGCAAC AAGAACCGAG TCGCCGCGAT GATCGCCATC CTGGTGTGCG GCGCACTGAT CCCCACGCTG GGCTTCTACG TGGCGCTCAC CTTCCAGCAG GTGCTCGGCT ACACCCCGCT CGAATCCGGT CTCGCGCTCG TGCCCTTCGC GGTGGGTATG GGTATCTCGG CCCCGATCTC CAGCCAGCTG GCGCTGAAAT TCCAGGCCCG CTGGCTCGTG GCGATCGGCG GCCTCATCGT CTTCCTTCCC TGCCTCTACG TGCCGACCCT CATGACGAGG GACCCGTCGA CGGTCAGCTA CTTCCCGTAC ATCGGGATTC CGGTGTTCAT CATCGGCCTC GGCGTCGGGC TCGCGATCGT GCCGCTGCCC ATCTGTGCGC TCGCGGGCGT GCGTCCCTCC GAGACCGGTC CGATGTCGGC GCTGGTCGAG GTGTGCCAGA ACCTGGGCGG CATCATCGGC CTCGCGTCCG TCCAGGTGCT CGTGACCTCG CGCATCATGA AGGAGGGCGG CCCGACCACC GGCGAGATCA GCCACGACGC ATTGTCCGAG GCGCAGCGGC ACGCGCTCGC CTCCGGTTAC GGCCTCGCCT TCATCGCGTG CGCCGCGATC CTGATCCTGG CCGGCCTGGT CGTGGTGCCG TTCATGCGGT TCACCCCCGA CGAAGTCGCC GAGGGGCAGG CGGCTCAGGA GTCCAACAAG TCCGGTGGTT CCATCCCGTC GACCTCGTTC CCGGCGCAGG CCTTCGAGGA CGACGATGTG GACGACGACT GGGAGCCGCT GGAGGGCGAT GTCACCTCCG GTTCGTTCGC GGCGATCCGG CGCGAAGACT TCGATCGCGC CTACAACGAG CAGCCCGGCG ACCCCGAGCC GGTGTACTTC ACCGACCGGT TCCGTGCGAT CAAACGCCCG CATGAGCCGC AGCCGCCCAC CCGGAACGTG CCCGTCGCGC CCCCGCAGCG CCCCGTCGCT CCGACCGGGC CGCAGCAGGC GTACTCGCAC CCCAGCGATC CGCTGCCGCG CCGCACCTCG CAGCCCGGCG ACGATCTCGC CGGCGTCGCG CGACCGTCCG GCCCGATCCG CCGGGAGAGT GCAGACCTGC AGCGGCCCGC CGTGCCCCCG CAGCCCGCAC GGCCACCGGC AGCGCGGCCC GCCCCGAGCG CGCAGTACCC CGTGCAACCG TCGCAGCGCC CCGTCGGTCC GCGCGCGAGC CAGCCGATCC GCCGGCCCGG ACCGCCGCCC CAGCATCCGA GCGCACCGAT GCAGCGCCCC AGCGGCGAGC TCCGCCCGAG TGGCCCGATG CAGCGGCCCA GCGCGCCGAT CCCGCGTCCG CACGAGTCGC AGTTCGTTCC CCCGGCCCCG CCGCGCACCG GCGGACGGCA CGCGATGCCC GACGACGATA TGCATCATCC GGCACCATCG GCCCAGGCCG AGCGTGTCAG CCGCGGTCGC CGGCACCGCC GCGATGAGGG TTGA
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Protein sequence | MAPGAPAQTY RVKGSALGVA IVVLSGMMFL AVLDGTVVFI AMPSIQDAMH LSDAAKIWVF GAYVLTFGGF MLLGGRLGDT FGRKRMFIVG VAGFTLASLL TGFASNEVWL LAARAGQGLF AAIACPTALA LIATTFAPGK ARNQAFAIFG AMAGLGSVAG LVAGGLLATI DWRLVFWINI PVGVVCVIGA IVALEESTAE RRHSLDVKGA FLAVTGCVAG VYALTMGPEV HWQSPSVYIA AVVCVVSLAV FLQVERTAKN PILPFSLFRN KNRVAAMIAI LVCGALIPTL GFYVALTFQQ VLGYTPLESG LALVPFAVGM GISAPISSQL ALKFQARWLV AIGGLIVFLP CLYVPTLMTR DPSTVSYFPY IGIPVFIIGL GVGLAIVPLP ICALAGVRPS ETGPMSALVE VCQNLGGIIG LASVQVLVTS RIMKEGGPTT GEISHDALSE AQRHALASGY GLAFIACAAI LILAGLVVVP FMRFTPDEVA EGQAAQESNK SGGSIPSTSF PAQAFEDDDV DDDWEPLEGD VTSGSFAAIR REDFDRAYNE QPGDPEPVYF TDRFRAIKRP HEPQPPTRNV PVAPPQRPVA PTGPQQAYSH PSDPLPRRTS QPGDDLAGVA RPSGPIRRES ADLQRPAVPP QPARPPAARP APSAQYPVQP SQRPVGPRAS QPIRRPGPPP QHPSAPMQRP SGELRPSGPM QRPSAPIPRP HESQFVPPAP PRTGGRHAMP DDDMHHPAPS AQAERVSRGR RHRRDEG
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