Gene Tpau_1640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1640 
Symbol 
ID9155790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1713602 
End bp1714870 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003646600 
Protein GI296139357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.229414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCCC CCGATATCAG ACTGCGGTTC ATGTCCCCTG GGCTCCTGCT CTTGCCCTGG 
GACCGTCCGC TCGCGCAGTG GAGTGTGCCC GACGTGCCGC TGCGCGACAT CGCGGTCGGT
GTGAGCCGGA ACCTCGTGAA GTTCGTCGAG ACCGATGGTG ATGTGTGGGC GGTGAAACAG
CTGTCGGTCG AGTCGGCGGA GCGCGAGTAC CGAGTTCTGC GGCGCCTGCA GGAGTTGGAG
CTCCCCGCCG TGCGGCCGGC GGGAGTGGTC AGGCAGGCGG GCGGCAGGGC GCTGCTGGTG
ACGCGGTACC TGTCCGGATC GTGGCAGTAC CGCAGGCTCT TCATGCGGTT GCCGCTGGAC
GAACCGAAGC ATCGAGCGCG GCTGTTGGAC GCGATGGCGA GTCTCATGGT CGAGCTGCAC
CGACACGGAA TCTTCTGGGG CGATTGCTCA CTCGCCAATA CGCTGTTCTG CCGCGACGGC
CAAGTCCTGC AAGCGCAGCT CGTCGACGCG GAGACGAGCG AGATCCATGC CGCGCTCAGC
GACGGCCAGC GCGGATACGA CCTCGACATC CTCGTCGAGA ACGTCGCCGC CGGCTTCTTC
GACATCTGCG AACGCCTCGG GCAATCGGAG ATGGCGGACG GCCTGATCGC CGAAGCGCGT
GGGATCCGGC GCAGATACGA ACGGCTCTGG GCGATCCTGC ACGACGAGCC CGTCGTGGGC
TACTCCGATC GGTTCCACAT CGACGGGAAG ATCCGCCAGC TCAACGACTT GGGGTTCGCG
GTGGAGGAGC TGACGCTCAA CCCCGTTGAG GGCTCGGCCG ACGACCTGCG GGTGCGCGTC
GCGGTCGGCG ATCGGAGATT GCACTCCAAT CGTCTGCTGA GGCTCACGGG TTTGGAGGCC
GGAGAAGGCC AGGCGCGCAT CCTGATCGGT GACATCCAGG GATACCAGGC CCAGCTGTGC
ATGGAATTCG GGCAGGACGT GGACGAGTCG ACAGCCGCGC GATTGTGGAT GACCGAGGTG
GCGATGCGTG GCATGCACGT GGCGCACGAG GCGGTCGGTG GTCGCGGCTC GGCTGTGCAG
GCCTACTGCG ATCTGTTGGA GATCAGGTGG CTGCTCAGCG AGCGTGCCGG CCGGGATGTC
GGAACGGATG TCGCCCTGGC GGCGCTCTCC CGCGAGGGTG CGCCGGAGGG GTCCGCGGCG
CGGCTCGCCG TCATCGAGAC CCCGACCAGT CCGCTGCCGA TCGTCGAGAT CGATACCGAC
GGCGCGTGA
 
Protein sequence
MTAPDIRLRF MSPGLLLLPW DRPLAQWSVP DVPLRDIAVG VSRNLVKFVE TDGDVWAVKQ 
LSVESAEREY RVLRRLQELE LPAVRPAGVV RQAGGRALLV TRYLSGSWQY RRLFMRLPLD
EPKHRARLLD AMASLMVELH RHGIFWGDCS LANTLFCRDG QVLQAQLVDA ETSEIHAALS
DGQRGYDLDI LVENVAAGFF DICERLGQSE MADGLIAEAR GIRRRYERLW AILHDEPVVG
YSDRFHIDGK IRQLNDLGFA VEELTLNPVE GSADDLRVRV AVGDRRLHSN RLLRLTGLEA
GEGQARILIG DIQGYQAQLC MEFGQDVDES TAARLWMTEV AMRGMHVAHE AVGGRGSAVQ
AYCDLLEIRW LLSERAGRDV GTDVALAALS REGAPEGSAA RLAVIETPTS PLPIVEIDTD
GA