| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1616 |
|---|
| Symbol | |
|---|
| ID | 9155766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 1693415 |
|---|
| End bp | 1694881 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | glutamate decarboxylase |
|---|
| Protein accession | YP_003646576 |
|---|
| Protein GI | 296139333 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.170706 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGCG AGCAGGGGGA AATCACGGCC GCCCGCGGCG CCCTGCCGAC GGGACGGTTC
GCCGGTAGCG TGCGGCGCAT GAGCGAGTTC AGCACGCCAC TCGATGATGA TTCGGTCCTC
ATGCCCGCGT ATTCGGGGCG GCTCGGAACG GAGCCCGTCC CCCGTGCCCG GCTCGCCGAT
CACGAGACCG GGCCGGCCGA GGCGTATCGC TTCATCCACG ACGAGCTGAT GCTCGACGGG
CAGTCCCGGA TGAACCTCGC GACCTTCGTC ACCACGTGGA TGGAACCACA GGGTCAGGCG
TTGATGGCGG AGGCCTTCGA CAAGAACGCC ATCGACCACG ACGAGTACCC GGCGACCTCC
GCGATCGATG CGCGGACCGT CGCGATCGTG GCCGAGCTGT TCCACGCTCC CGGCCTCGAT
CCGGCCGATC CACTGTCGGC GACGGGAACG ACGACGATCG GCTCGTCGGA GGCGGTGATG
CTGGCGGGCC TGGCGCTCAA GTGGCGCTGG CGCAAGGCGC GGCTCGCCGC AGGCGGCGAT
GCGAGCCGCC CCAAACTGGT GCTGGGCAGC AATGTGCAAG TGGTGTGGGA GAAGTTCTGC
CGATACTTCG ACGTCGAGCC GGTGTACCTG CCGATCGCGC CCGGCCGGTA CACCATCACG
CCGGAGCAGG TGCGGGACGC GGTCGACGCG GACACGATCG GCGCCGTCGC GATCCTCGGT
ACCACCTTCA CCGGTGAATA CGAAGACGTC GCAGGCATCT GCGCCGCACT GGACGCAGTG
GCGGAGTCGG GCGGTCCCGA TGTGCCGGTG CACGTGGACG CGGCCAGCGG CGGTTTCGTG
GCGCCGTTCC TCGATCCCGA CCTGGAGTGG GACTTCCGGC TTCCCCGCGT CGCGTCCATC
AACGTCTCGG GCCACAAGTT CGGTCTCACC TATCCGGGCA TCGGATTCGT GGTCTTCCGC
GACCGCGCCG CCCTCGACGA GGACCTGGTG TTCCGGGTGA ACTACCTCGG GGGCGACATG
CCTACGTTCA CCCTGAACTT CTCCCGTCCG GGCGCGCAGA TCATCGGGCA GTACTACAAC
TTCGTGCGGC TCGGGCGGCA TGGATACACC CGGGTGATGG AGTCGTTGCG CGGCACCGCC
ACCTGGCTCG CACGCCAGTT GGCGGCGCAG CCGTACCTGT CGGTGATCAC CGACGGTTCG
GCACTGCCCG TGGTCACCCT TCACTTGGCC GACGACGCGC CGTTCACCGC GTTCGACGTC
TCGCACGAGC TGCGCACCTG CGGCTGGCAG GTGCCGGCGT ACACGATGCC GGCCGACGCG
CAGGAGGTGA CGGTGCTGCG AATCGTGGTG CGGGAGGGCT TCTCCGGCGA TCTGGCGGGC
AAGCTGCGCG ACGATTTCGC GGCGGCGCTC ACGCGCCTGT CCGCGGCGGA CGGTCGCGCC
GCCCCGCGGT CGGTGTTCCA CTACTGA
|
|---|
| Protein sequence | MPREQGEITA ARGALPTGRF AGSVRRMSEF STPLDDDSVL MPAYSGRLGT EPVPRARLAD
HETGPAEAYR FIHDELMLDG QSRMNLATFV TTWMEPQGQA LMAEAFDKNA IDHDEYPATS
AIDARTVAIV AELFHAPGLD PADPLSATGT TTIGSSEAVM LAGLALKWRW RKARLAAGGD
ASRPKLVLGS NVQVVWEKFC RYFDVEPVYL PIAPGRYTIT PEQVRDAVDA DTIGAVAILG
TTFTGEYEDV AGICAALDAV AESGGPDVPV HVDAASGGFV APFLDPDLEW DFRLPRVASI
NVSGHKFGLT YPGIGFVVFR DRAALDEDLV FRVNYLGGDM PTFTLNFSRP GAQIIGQYYN
FVRLGRHGYT RVMESLRGTA TWLARQLAAQ PYLSVITDGS ALPVVTLHLA DDAPFTAFDV
SHELRTCGWQ VPAYTMPADA QEVTVLRIVV REGFSGDLAG KLRDDFAAAL TRLSAADGRA
APRSVFHY
|
|---|
| |