Gene Tpau_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1566 
Symbol 
ID9155716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp1635050 
End bp1635634 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content68% 
IMG OID 
Productprotein of unknown function DUF177 
Protein accessionYP_003646526 
Protein GI296139283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0425556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGAAA CCCAGACCGC CGTGCGGCAG CCGGCCGGTA AGCCGTACGT CCTCGACGTC 
CGCAGTTTCG GTCGCCGCCC GGGCACGTCA GCGCAGGTGC ACCGGACTGT GGCCGCCCCC 
GACCGGATCG GCGTCGATCT CATCGCGATC GACGCGGGCG AGGAGATCGA CCTCGACCTG 
CAGGTGCAGG CCGTATCCGA GGGTGTGCTG GTCACGGGCA CCGTGAGCGC CGATACCACC 
GGCCAGTGCG CTCGCTGCCT GGCCGATATC TCGGGCGCCG TGAACCTCTT CCTCACGGAG 
CTGTTCGCGT ACCCGGATAG TGAGACCGAT AAGACCACCG ATGAGGACGA GATGTTCCGC 
ATCGATGACG ACATGATCGA CCTCGAGCAG GCCATCATCG ATGGCGTCGC ACTGGAGCTG 
CCCCTCGCCC CCGTCTGCAC CGAGAACTGC CCGGGCCTGT GCCAGGGCTG CGGTGAGCGG 
CTCGCCGAGC TCGAACCGGA CCACGCACAT GAGCAGATCG ACCCCCGCTG GGCGGGCCTG 
GCGAAGTTCG GGTCCGGCGC CGAGGGCGGG GCCGACCAGA AGTGA
 
Protein sequence
MNETQTAVRQ PAGKPYVLDV RSFGRRPGTS AQVHRTVAAP DRIGVDLIAI DAGEEIDLDL 
QVQAVSEGVL VTGTVSADTT GQCARCLADI SGAVNLFLTE LFAYPDSETD KTTDEDEMFR 
IDDDMIDLEQ AIIDGVALEL PLAPVCTENC PGLCQGCGER LAELEPDHAH EQIDPRWAGL 
AKFGSGAEGG ADQK