Gene Tpau_1534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1534 
Symbol 
ID9155684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp1604729 
End bp1605478 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003646496 
Protein GI296139253 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0334786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGATCG GAGACGTGGC CCGCATCGTC GGCGTATCCA CCCGCACGAT TCGGCATTAC 
CACCGGATCG GACTGCTCGG CGAGCCGGCG CGCGAGTCGA ACGGATACCG CACCTACGGA 
CTCGACGATG TCGTGCTCCT GCTGCGCATC CGCCGCCTCG CCGAGACCGG AATGTCGCTC 
GACGAGATCG CCGACGTGCT CGATGACGAC GAACGCCACC GCGACCTCGA TGAGGTGCTC 
GCCGAGCTCG ACGCCGACCT CGCCCGGCAG GAGGATGCCA TTCGTGACCG CCGCCGACGC 
CTGGCAGAAC TCCGGTTCAC CGCCTCCGGC TCGCTCATGA CCGAGCGCGT CGACACCATC 
GCCCGGCGGA TCGCGGAGGT CTACGACGGC GCCGCGGCCA GGATGGAACT CGCGGTCATG 
GAGGTACTCA CCGCCGTGGT GCCGGGAGCC GTCGATGCCT ACGAGAGCGC GCTCGACGAT 
CCGGCGGTGG TTGCGGCATC CAGCGAGATC GCCACGGACT TCGAGGCGCT GCGTACCGCC 
GATCCCGACG CGCCCGAGGT TCGCGCCCTG GCCGAGCGCA TCGTCGCCGC GGCGGGCGCA 
CTCGAGTTCT CCGCCGGTGC GGGCTCGGAC GCGCCTCGCG TCCTGATCGA GGATGTGACC 
GCGTGGTTCG ACTCCGCCGA CTGGATGTCG CGGGCACAGC GGCGTTGCAT CGACGTGATG 
ATGCAGCAGA TGATCGGGCG CCGGCCGTGA
 
Protein sequence
MRIGDVARIV GVSTRTIRHY HRIGLLGEPA RESNGYRTYG LDDVVLLLRI RRLAETGMSL 
DEIADVLDDD ERHRDLDEVL AELDADLARQ EDAIRDRRRR LAELRFTASG SLMTERVDTI 
ARRIAEVYDG AAARMELAVM EVLTAVVPGA VDAYESALDD PAVVAASSEI ATDFEALRTA 
DPDAPEVRAL AERIVAAAGA LEFSAGAGSD APRVLIEDVT AWFDSADWMS RAQRRCIDVM 
MQQMIGRRP