Gene Tpau_1532 details

Gene Information

• Locus tag: Tpau_1532
• ID: 9155682
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1603353
• End bp: 1604009
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 70%
• Product: channel protein, hemolysin III family
• Protein accession: YP_003646494
• Protein GI: 296139251

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.104876
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGTCG TCGGTGTGCC CGAGGTCAAA CCGCGGTTGC GCGGTGTGAT TCACCAGTTC 
GGCGCGCTCG GGGCGATCGC TCTGGGCGTC CCGCTGGTGA TCGCCGGCTT CCGGCAATCC 
GCTGGCGCCG GCCTCGCCCT GCTGGTCTAC GCGATCACCG TGTTCGGCGT GTTCGGGGTG 
AGCGCGGCCT ACCATCGCGG ACGCTGGACC GACGCGCAGC GCATCTGGAT GAAGCGCGCC 
GACCACTGCA TGATCTTCGT CTTCATCGCC GGCAGCTACA CGCCGATCGC GGTGCTGGCA 
TTGCCGTCCG GCGTCGCCCG GTGGGTACTC GCGGTCGTCT GGGGCGGCGC GCTCGCCGGC 
GTCGCGCTGA AACTGCTGTG GCCGCACGCA CCGCGCTGGG TGGGCGTCCC GCTGTACATC 
GCCCTCGGCT GGGTCGTGGT GGCCGTCGCG GGCGATCTGG TCGACGGTGC GGGGTGGACG 
GCCTCGGCAC TGCTCGCCAT CGGTGGCGTG CTCTACAGCG GCGGAGCGGT GCTCTATGCC 
ACTCGCTGGC CCGACCCCTG GCCCGGCGTG TTCGGGCATC ACGAGTTCTT CCACGCCGCC 
ACCGTGGTCG CGGCCCTGTG TCATTACGCG GCGATGTGGA TCATCCTGCT CCGATGA 

 

Protein sequence

MTVVGVPEVK PRLRGVIHQF GALGAIALGV PLVIAGFRQS AGAGLALLVY AITVFGVFGV 
SAAYHRGRWT DAQRIWMKRA DHCMIFVFIA GSYTPIAVLA LPSGVARWVL AVVWGGALAG 
VALKLLWPHA PRWVGVPLYI ALGWVVVAVA GDLVDGAGWT ASALLAIGGV LYSGGAVLYA 
TRWPDPWPGV FGHHEFFHAA TVVAALCHYA AMWIILLR