| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1395 |
|---|
| Symbol | |
|---|
| ID | 9155543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 1464854 |
|---|
| End bp | 1465336 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003646362 |
|---|
| Protein GI | 296139119 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00858881 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAGTG GTGATCACGG AAACAGCGTC GCCGTCCCGT CGGGAGACCT GCCCATCGGC
ACGGTCATCA CGTCGAGCGG CCGGATCTCC GCCGCCCGCC AGGCCGGCGA CAGCCCCGTC
AACCCGCCGT TCACCCGCGA GGAGCTGATC GGCCTCGACG AGGCCCTGAT CCGCGCTACT
CGCGATGCGA AGGCCCGGTT CTCGGTCTAC ATCGGAGACC TCGGTGATGA CGTGTACGCC
GGCGCCGAGG CGGTCCTGCG GCAGGCGCCC GAACCCGAGT ACGGAGCGCT CATCGCGGTC
TCACCGAACA GCAACGACAT CGTGGTCGTC ACCGGCCGCG AGGTGGCCGA CCGCCTCGGC
GACAAGGTCG CCCAGCTCGG TGTGACCGCC GCGATCCCGC CGTTCCAGAA GGGCGATCTG
ATCGACGGCC TGATCGCCGC CCTGCGCGTG ATGGCGTCGG CGGTGAAGCC TCCGACGGCC
TGA
|
|---|
| Protein sequence | MASGDHGNSV AVPSGDLPIG TVITSSGRIS AARQAGDSPV NPPFTREELI GLDEALIRAT
RDAKARFSVY IGDLGDDVYA GAEAVLRQAP EPEYGALIAV SPNSNDIVVV TGREVADRLG
DKVAQLGVTA AIPPFQKGDL IDGLIAALRV MASAVKPPTA
|
|---|
| |