Gene Tpau_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1378 
Symbol 
ID9155526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp1442641 
End bp1443357 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content70% 
IMG OID 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_003646345 
Protein GI296139102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.365904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAACCC TGCTGGTGGC GCACGGTACG CGCAACAACC ACGGTGTCGC GATGATCGCC 
GATCTCGCCG CGGCGATGGC GGATCGGCTG GACGAGCAGG TGCGGGTGGC CTTCGTCGAT 
GTTCTGGGAC CCACCCCGAG CGAGGTGCTG ACGAGCCTCG AGGAGCGCCC CACCGTCGTG 
GTACCCGCCT TCCTATCCAG CGGATTCCAT GTGTGCCACG ATCTTCCGCG CGAGATTGCT 
GAATCCGCGC ACCCCGCGGT CACCGTCACC GATGCACTCG GTCCATCGCC GGAGCTCGCG 
CGCGCCATGC TCGGACGATT GCTCGACGCC GGCTGGCGTC GCGGCGACGC CGTGGTGATG 
GCCGCGGCGG GCACGCGTGA TCCCCAGGCA CAAGGGCAGA TCCGGGCGAC TGCTGCGATG 
CTCTCGGCGC TGGTCGGGGG CAGGGTGCGC ATCGCATTCG CGGCGCCACC GAAGGACGGT 
TCCGGGTACC CCTCGGTGCC CGAGGTCGTG GCGGCGGCCC GTGCCGACGG TGCGCGGACC 
GTCGCGGTAG CTTCATATCT ATTGGCGGAG GGGCTGTTCC AGCAGCGTCT GCGCGAATCC 
GATGGTGATA TCGTGGCCGA TCCACTGGGG CTGCATCCGG CGGTGGTGCG TCTAGCGTGT 
CTGCGCCGCC GACACGCCGG CTTCGCGGTC ACCGGCCGGG TGGCGCCCGC GCGCTGA
 
Protein sequence
MGTLLVAHGT RNNHGVAMIA DLAAAMADRL DEQVRVAFVD VLGPTPSEVL TSLEERPTVV 
VPAFLSSGFH VCHDLPREIA ESAHPAVTVT DALGPSPELA RAMLGRLLDA GWRRGDAVVM 
AAAGTRDPQA QGQIRATAAM LSALVGGRVR IAFAAPPKDG SGYPSVPEVV AAARADGART 
VAVASYLLAE GLFQQRLRES DGDIVADPLG LHPAVVRLAC LRRRHAGFAV TGRVAPAR