| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1357 |
|---|
| Symbol | |
|---|
| ID | 9155505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 1416275 |
|---|
| End bp | 1417456 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003646325 |
|---|
| Protein GI | 296139082 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAT CGATCCGCCA GGACGGTACG CCGCGACCGG TGCGCGTCGC CGTGATCGGT
ATGGGCTGGA TGGGCCGGGT GCACGCCCAG GCCTACGCCC GCGTCTCGCA CCACTACCCC
GAGGGGCCCG CCCGCGCGGT GCTCGTGGCG CTCGCCGACG ATGTCTCCGG CAGAGCTGCG
CAGTTCGCGG AGCAGTTCGG AGCCGAGCGG GCGTACACCG ATTGGCGCGA GGTGGTCGCC
GATCCCGCCG TTGAGGCCGT GTCGGTCACT GCCCCGAACT TCCTGCATCG GGAGATCGGA
ACCGCGGTCC TGGCGGCGGG TAAGCACCTG TGGATCGAGA AGCCGGTGGG GCTCACCGCC
GACGATGCTC GCGCGGTGGC CGACGCGGCG ACCGCGGCCG GGCGGATGAC CGCGGTCGGC
TTCAACTACC GCAATGCGCC CGCGGTGCGT GCCGCGCGCG ACCTCATCGC CGACGGCGCG
ATCGGGGCGG TGACGCATGC CCGGTTCCGC TTCTTCAGCG ATTACGCCGC CCATCCCGAC
GGTGCGCTCA CCTGGCGCTA CCAGCGCGAC CGCGGTGGTA ACGGGGTGCT CGGCGATCTC
GGTTCGCACG GCGTGGACCT GGTGCGGCAC CTGCTCGGCG ACATCGATGC CCTGGTCGCC
GATTCCGCGG TCTTCATCCC CGAGCGAGCC GTGCCTGCGG GGGCCACCTC GGGGCATCAG
CGGGTGGCCG CCGGGGGCGC ACGCGGCCGG GTCGAGAACG ATGATTACGC CGCAGCGCAG
CTCCGCCTGG CCTCCGGTGC GCGGTGCGTC GTGGAAGCCA GCCGCGTCGC GGTGGGCGAG
CAGAATTCGT ACGGCTTCGA GGTGCACGGA ACCAGCGGGA TGGTGCGCTG GGACTACCGC
CGGATGGGCG AGTTGGAAAC CTCGTTGGGC AGCGCCTATC AGGATCAATC GGTCTCCACC
GTGTACATCG GACCCGGGAG CGGCGACTTC GCGGCTTTCC AGCCGGGCGC GGCGAACCCG
ATGAGTTATG ACGATCTCAA GGTGATCGAA GCGCAGTGCT TCCTGCGGTC GATCGTGACG
GGCGTCCCCG AGGGCGCCAC GGCGGCCGAC GCCGTGTACA GCGCTCGCGT CGTCGATGCC
ATGACCGAGT CGGTCGCCGC AGGCAGGTGG GTCTCCCTGT GA
|
|---|
| Protein sequence | MTESIRQDGT PRPVRVAVIG MGWMGRVHAQ AYARVSHHYP EGPARAVLVA LADDVSGRAA
QFAEQFGAER AYTDWREVVA DPAVEAVSVT APNFLHREIG TAVLAAGKHL WIEKPVGLTA
DDARAVADAA TAAGRMTAVG FNYRNAPAVR AARDLIADGA IGAVTHARFR FFSDYAAHPD
GALTWRYQRD RGGNGVLGDL GSHGVDLVRH LLGDIDALVA DSAVFIPERA VPAGATSGHQ
RVAAGGARGR VENDDYAAAQ LRLASGARCV VEASRVAVGE QNSYGFEVHG TSGMVRWDYR
RMGELETSLG SAYQDQSVST VYIGPGSGDF AAFQPGAANP MSYDDLKVIE AQCFLRSIVT
GVPEGATAAD AVYSARVVDA MTESVAAGRW VSL
|
|---|
| |