| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1341 |
|---|
| Symbol | |
|---|
| ID | 9155488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 1396412 |
|---|
| End bp | 1397218 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003646309 |
|---|
| Protein GI | 296139066 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTAC CCGCACCCAA TTCCTCTGCA CGCGCCGTTG TGACCGGGGG CTCCTCCGGC
ATCGGCGTGG CCCTCGCGAC CGAGCTCGCC CGCCGCGGCC ACTCCGTGAT CCTCGTGGCC
CGCAGCACCG GCCCGATGGA AGAGCTGGCG GCGAAGCTGC GCGCCGAGTT CGGCGTGGAG
GCCGAGGTCC GCGGTGTCGA CCTGTCCGAT CACGTCGCCC GCGACGAGCT GTGCACCGAG
CTCGCGGGCC GGGAGATCTC GATCCTCTGC AACAATGCCG GAACCGCGAC CTTCGGCCGC
GTCATCGACC TCGACTTCGA CTACGAGCGC GCGCAGCTGG AGCTCAACGC CAACGCCGTG
CACGATCTGA CTCTCGCGGT GCTGCCGCAG ATGGTCGAGC GCGGCAACGG CGGCATCATG
ATCACCGGTT CGGCGGCGGG CAACATGCCG ATCCCGAACA ACGCCACCTA TGCGGCGTCC
AAAGCCTTCG CGAACACCTT CTCCGAATCG CTGCGCGGCG AACTCAAGAA CACCGGCGTG
CACGTCACGC TGCTCGCTCC GGGACCCGTG CGCACCGAAC TCCCCGACCC CGAAGACCGC
TCCACCGTGG AGAAGGTCGT CCCCGAATTC CTCTGGGTCA ACACCGAATA CACCGCCCGC
ATCACCCTCG ATGCGCTGGA GAAGAACAAG ATGCGCGTAG TACCCGGGCT ACTGTCCAAG
GGCATGTCGC TGGCCGGCAA CTACACCCCG CGCGGCATCA TGGCCCCCAT CGTCGGCGAG
ATGTACAAGA AGCTCGCAGG CAACTAG
|
|---|
| Protein sequence | MPVPAPNSSA RAVVTGGSSG IGVALATELA RRGHSVILVA RSTGPMEELA AKLRAEFGVE
AEVRGVDLSD HVARDELCTE LAGREISILC NNAGTATFGR VIDLDFDYER AQLELNANAV
HDLTLAVLPQ MVERGNGGIM ITGSAAGNMP IPNNATYAAS KAFANTFSES LRGELKNTGV
HVTLLAPGPV RTELPDPEDR STVEKVVPEF LWVNTEYTAR ITLDALEKNK MRVVPGLLSK
GMSLAGNYTP RGIMAPIVGE MYKKLAGN
|
|---|
| |