Gene Tpau_1280 details

Gene Information

• Locus tag: Tpau_1280
• ID: 9155424
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 1321381
• End bp: 1323414
• Gene Length: 2034 bp
• Protein Length: 677 aa
• Translation table: 11
• GC content: 71%
• Product: helicase c2
• Protein accession: YP_003646249
• Protein GI: 296139006

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0225088
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACTGAAC CGCCGATCGT GCCGAAACTC CTCGACACCG CGGTCACGGC ACTGGGCGGG 
AGCAAGCGCG ACGGGCAGGT CCGCATGGCC GCCGCCGTGG CGCACTCGCT GGACACGGGA 
GAGCACCTCG CCGTGCAAGC CGGTACCGGC ACCGGCAAGT CCCTCGCCTA CCTCGTGCCG 
TCCATCCGAC ACGCCGTGAC CACCGGCAAG ACCGTGGTGG TGAGCACCGC GACCATCGCG 
CTGCAGCAGC AGCTGGTGGA CCGCGACCTG CCACGGCTGT CCAAGGCCCT GAAGAAGGAC 
CTGGGCCGCG AGCCCGAATT CGCCATCCTC AAAGGTCGCG GCAACTATCT GTGCCTGAAC 
AAACTGCACA GCTCCGTGGC CTCCGAGCCC GACAGCGAGG AGCTGTTCGA CCCGTTCGCC 
GCGTCACGCC TGGGCCGCGA GATGAAGCGG ATCCGGGAGT GGAGCAGCGA CACCGAGACC 
GGTGATCGCG ATGAGCTCTC CCCTGCCGTC ACCGATCAGT CATGGCGCCT GGTGAGCGTG 
GGCGCGCGGG AATGCCTGGG CGCCACCAAC TGTGCGTACG GGCAAGACTG CTTCGCCGAG 
ACCGCGCGCA AGCGCACCGG TCAGGTGGAT GTGGTGGTCA CCAATCACGC GCTGCTCGCC 
ATCGACGCCA TGACCGAGGT CAATGTGCTC CCCGATCACG ATGCGGTGGT CGTCGATGAG 
GCACATGAGT TGGTCGACCG GGTCACCTCG GTGGCCACCG CCGAACTCAC CGGGGCCACG 
GTGGCCGCCG CTGCGCGTCG GGCCGGGAAA CTGGTCGAAG AGGAGATCGC CGACAACCTG 
GTCGCCGCCT CGGAAGGGCT CACCGCGCTC CTGGAGGAGT CGGGTTCGCG TCGCTGGCTC 
GGTCTGCCCG ACGGTGCCGG CCCCGCCCTC GCTGCGGTCC GTGATGCCGC CTGGGCCACG 
CGGACCGCAG TCGGGCCGGC GCGCGGTGCC AACCTCGACC CCGATGCGGC GGCAGCACGC 
AGCGCCGCGA TCACCGCCCT CGACGAGGTG CACGACACCG CGGTCCGCGT CCTCACCGCC 
TTCGACGAGC CCGATGAGGC CAAACGCCGC GATGTGGTGT GGACCTCGGA CGTCCCGGTG 
CGCGGCGGCG GCTTGAGGCG CACGCTGCAC GTCGCGCCGC TCTCGGTGGG CGGACTGCTG 
CGTTCGCGGC TGTTCGGGGA GTCCACCGTG GTGCTCACCT CCGCGACGCT GGCGGTGGGC 
GGCGCCTTCG ATAGCGTCGC GGGCTCGTGG GGGCTGCCCC GCGCCGGCGG CGGCGAACCG 
GACCGTGACC CCGATCTGGC GTCGGGGAAG AAAGCCGATG CGACGGTGGA GTGGAGCCAC 
CTCGACGTGG GCTCGCCCTT CGACTACGCC CGCTCGGGCA TCCTTTACGT GGCGACCAAG 
CTGCCGCCTC CCGGCCGCGA CGGCACCAAT CCGGTGATCC TCGATGAGAT CGAGACGCTC 
ATCAAGGCCG CGGGCGGGCG CACTCTGGGA CTGTTCAGCT CGACCCGGGC GGCCAAGGCC 
GCGGCCGAGG CGCTGCGCGA GCGACTCGAC ACCCCGATCC TGTGCCAGGG CGAGGGCAAC 
ACCGGCCAGC TGGTGCGCGA TTTCGCCGCG GATCCGGCCA CCTCTCTGTT CGGCACGCTG 
AGCCTGTGGC AGGGTGTCGA CGTACCGGGG CCGTCGCTAT CGCTGGTGCT GATCGACCGG 
ATCCCGTTCC CACGCCCTGA CGATCCGCTA CTGACCGCCC GGCAACGCGC CGTGGAATCT 
CGGGGCGGCA ATGGATTCAT GGCCGTGGCC GCGACCCACG CGGCATTGCT GCTCGCGCAG 
GGAGTCGGGC GGCTGTTGCG CTCGACCGAC GACCGGGGCG TCGTGGCGGT GCTGGATTCA 
CGGCTCGCGA CCGCCCGCTA CGGAGGATTC CTGCGAGCCA CGCTGCCACC GTTCTGGGAG 
ACCGCGAACC GCGATACCGC GGTCGCCGCC CTCCAACGGC TCGCCGAGTC CTGA 

 

Protein sequence

MTEPPIVPKL LDTAVTALGG SKRDGQVRMA AAVAHSLDTG EHLAVQAGTG TGKSLAYLVP 
SIRHAVTTGK TVVVSTATIA LQQQLVDRDL PRLSKALKKD LGREPEFAIL KGRGNYLCLN 
KLHSSVASEP DSEELFDPFA ASRLGREMKR IREWSSDTET GDRDELSPAV TDQSWRLVSV 
GARECLGATN CAYGQDCFAE TARKRTGQVD VVVTNHALLA IDAMTEVNVL PDHDAVVVDE 
AHELVDRVTS VATAELTGAT VAAAARRAGK LVEEEIADNL VAASEGLTAL LEESGSRRWL 
GLPDGAGPAL AAVRDAAWAT RTAVGPARGA NLDPDAAAAR SAAITALDEV HDTAVRVLTA 
FDEPDEAKRR DVVWTSDVPV RGGGLRRTLH VAPLSVGGLL RSRLFGESTV VLTSATLAVG 
GAFDSVAGSW GLPRAGGGEP DRDPDLASGK KADATVEWSH LDVGSPFDYA RSGILYVATK 
LPPPGRDGTN PVILDEIETL IKAAGGRTLG LFSSTRAAKA AAEALRERLD TPILCQGEGN 
TGQLVRDFAA DPATSLFGTL SLWQGVDVPG PSLSLVLIDR IPFPRPDDPL LTARQRAVES 
RGGNGFMAVA ATHAALLLAQ GVGRLLRSTD DRGVVAVLDS RLATARYGGF LRATLPPFWE 
TANRDTAVAA LQRLAES