| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1269 |
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| Symbol | |
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| ID | 9155413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 1307906 |
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| End bp | 1309144 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003646239 |
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| Protein GI | 296138996 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCGAC GCGCCGCGCT TGCGGGCTTC GGCGCGTTCG CGGCGTCCGG AGTGTTGGCG
GCGTGCGGGT CGAACACCGG ACGCGGTTCG TCGGGTGACC TGACGGTCTG GTTCCACGAG
TACGGCGAGA AGGGAACCGG GACCGCGCTC CGGCGGTATG CGTCGGGGTT CCCGGGCGGC
GGTGTCTCCA CGCTCACCTT CCCCGGTGAC TACGATCAGA AGGTCGCATC GGCGCTGATC
GGAGACAGTG GGCCGGACGT CTTCGAGTTC GCGAACGGCC CCACGATCGA CATGATCACC
GCGGGTCAGG TCGCCGATCT CACCGATCTG CTCGGCGATG CCCGTTCCGA TTTCAATCCA
GCTCTCCTGG ACCGGATGAC CTATCGCGGG AAGGTCTACG GTATCCCGCA GGTGATGGAT
GTCCAGGTGC TGGTGTACCG CAAGTCGATG TTGCAGAAGG CGGGCGTGCG TCCGCCGCGC
ACCGTCGATG AGCTGGTGTC GGCGGCCGAG GAGCTGAATC AGGGCACCAC CAAGGGGCTC
TTCCTCGGTA ACAACGGTGG CGCCGATGTC CTCGGCGGGG TCCTGTTGTG GTCGTCGGGG
CACGACTACC TGACCCCGGA CCGCAAGCCC GGTTTCGTCA ATGAGGATGT GGCGTCCGGC
CTGCGCACGA TGCGCAAGCT GTTCACCTCG GGAAACCTGT TGCTCGGCGC GCCGCAGGAC
TGGTCGGATC CGGGAGCCTT CATCGCGGGC CTGACCGCCA TGCAATGGAC CGGACTCTGG
GCGTTGCCGG CGATCACGGA GGCCCTGGGC GACGATGTCG GCGTGCGGGC GTTCCCCGCG
ATCGGCACCA ACGGTGGCGA CAGTGTGCCG TTCGGCGCGT ACGGCTCCGC GGTGAGCACG
AAGGGGGATC TCGCGAAGGC GAAGAAGTTC GTGCAGTGGC TGTGGGTGGA ACGCTCCGAC
CTGCAATTGG ACTGGGCGCA GGGCTACGGG TTGCATGTGC CCGCCCGGCG TTCGCTGGTT
CCACAGGCGA ACAAACTCTC GACCGGTGTC TACAACGAGG CGTCCAAGCT CGTCTACTCG
GTGGGCCGCC CGCAGACCCC GCTGCTGTGG ACCCCGCGGA GCTCGACGGC CTACCGGGAC
GCGTTGGACC GAGTGATCCG CGGCGGTGCC GACCCGATGA CGGAGTTGCG CGGCGTGGCG
GACGTGGTGG AACGAGAACT GGACCGGTTC CCCGCCTGA
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| Protein sequence | MSRRAALAGF GAFAASGVLA ACGSNTGRGS SGDLTVWFHE YGEKGTGTAL RRYASGFPGG
GVSTLTFPGD YDQKVASALI GDSGPDVFEF ANGPTIDMIT AGQVADLTDL LGDARSDFNP
ALLDRMTYRG KVYGIPQVMD VQVLVYRKSM LQKAGVRPPR TVDELVSAAE ELNQGTTKGL
FLGNNGGADV LGGVLLWSSG HDYLTPDRKP GFVNEDVASG LRTMRKLFTS GNLLLGAPQD
WSDPGAFIAG LTAMQWTGLW ALPAITEALG DDVGVRAFPA IGTNGGDSVP FGAYGSAVST
KGDLAKAKKF VQWLWVERSD LQLDWAQGYG LHVPARRSLV PQANKLSTGV YNEASKLVYS
VGRPQTPLLW TPRSSTAYRD ALDRVIRGGA DPMTELRGVA DVVERELDRF PA
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