| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1211 |
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| Symbol | |
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| ID | 9155351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 1236070 |
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| End bp | 1239789 |
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| Gene Length | 3720 bp |
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| Protein Length | 1239 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | 2-oxoglutarate dehydrogenase, E1 subunit |
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| Protein accession | YP_003646181 |
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| Protein GI | 296138938 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.191294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAGCA GTTCTGTATC GGATTTCGGC CAAAACGAGT GGCTGGTCGA GGAGATGTAC
GAGCGGTTCA AGGCCGACCC TAATTCGGTC GACCCGAGCT GGCACGATTT CCTCTCCACG
TATCAGCCCG GCGCCGCCGC GGCGAATGGC AGCGCACCCG CTGCGGCCGC AGCGCCTGCG
GCCCCCGCCG CTCCCGCTCC GGCGGCCGCG GCCCCGGCGG TGACCCCGCC CGCGAAGGCG
GCCGAGTCCA CGCTGACGCC GGCACCGTCG AAGCCGGTCA CTCCCGCCCC GTCGTCCCCC
GCGAAGCCGG CGCCGGCGCC GAAGACTCCC GCCACGGCGG AGTTCCCGGC CGAGGAGGAG
CACCAGGTGC TCCGCGGCGC CGCGAATGCG GTGGTCAAGA ACATGAACGC CAGCCGCGAG
ATCCCGACGG CCACGTCGGT GCGCGCGATG CCGGTGAAGG TGATGTTCGA CAACCGCGTG
GTGATCAACA ACCACCTCGC GCGTACCCGC GGCGGCAAGA TCAGCTTCAC CCACATCCTC
GGGTATGCGC TGGTCCAGGG CGTCAAGGCG TTCCCCAACA TGAACCGGCA CTTCGCCGAG
ATCGACGGTA AGCCGAACGC CGTCACACCA CCGCATGTCA ACCTGGGCAT CGCGATCGAC
CTGGTGGGCA AGAACGGAAG CCGCAGCCTG GTGGTGGCCG GCGTCAAGAA CGCCGAGACC
ATGGACTTCG CACAGTTCGT GGCCGCCTAC GAGGACATCG TGCGCCGGGC CCGCAACGGC
AAGTTGACCG CCGAGGACTT CGCCGGGGTC ACCATCTCGC TGACCAACCC GGGCGGTATC
GGCACGGTGC ACTCGGTGCC CCGTCTGATG GTGGGCCAGG GCGCGATCAT CGGCGTCGGT
GCCATGGAGT ACCCGGCCGA GTTCCAGGGC GCCAGCGAGG AGAAGATCGC CGATCTGGGA
GTCGGCAAGC TCACCACGCT GACCTCGACC TACGACCACC GCATCATTCA GGGCGCCGAG
TCGGGCGACT TCCTGCGCTA CGTCCACGAG CTCACCCTGA GCGACGAGTT CTGGGACGAC
ATCTTCCGCA CCCTGCACGT GCCCTACGAG CCCGTGCGCT GGCGTCGCGA CATCCCCCCG
CACGGCATCG ACAAGGACGC CCGCGTTCTT GAGCTGATCG CGGCCTACCG GGCCCGCGGC
CACCTGATGG CCGATGTGGA TCCGCTGCGG TTCAACAACG ACAAGCTCGA ATCGCACCCC
GACCTGAACG TGCTCACCTA CGAGCTGACG CTGTGGGATC TGGACCGCAC GTTCAACGTG
GGTGGTTTCC ACGGCGAAGA CCGGCTCAAG CTGCGCAAGG TGCTCTCGGT GCTGCGCGAC
GCCTACTGCC GGCACGTGGG TATCGAGTAC GCGCACATCC TCGAGCCCGA GCAGCAGAAG
TGGCTGCAGG AGCGCGTCGA GGCCAAGGAT TCCAAGCCCT CGGTCGCCGA GCAGAAGTAC
ATCCTGTCCA AGCTCAACGC CGCCGAGGCC TTCGAGACGT TCCTGCAGAC CAAGTACGTC
GGCCAGAAGC GGTTCTCGCT GGAGGGCGCC GAGTCGGTCA TCCCGATGAT GGACGCCGTC
CTCGATCAGG CCGCCGAGCA CTCGCTCGAT GAGGTCGTGA TCGGCATGCC GCACCGCGGC
CGCCTCAACG TGCTGGCGAA CATCGTCGGC AAGCCGTACA GCAAGATCTT CACCGAGTTC
GAGGGCAACC TGAACCCGGC GCAGGCACAC GGCTCGGGTG ACGTGAAGTA CCACCTCGGC
GCCGAGGGCA AGTACTACCA GATGTTCGGC GAGAACGAGA TCACCGTCTC GCTGGTCGCC
AACCCGTCGC ACCTCGAAGC GGTCGACCCC GTGCTCGAGG GCATCGTGCA CGCCAAGCAG
GACATGCTGA ACCCGCCGGA GGGCACGCAC CCCGTCATGC CGCTGATGCT GCACGGCGAC
GCCGCCTTCG CCGGTCAGGG CGTGGTGGCC GAGACGCTCA ACATGGCGAA CCTCGACGGC
TTCTCCAACG GCGGCACCGT GCACATCGTG GTGAACAACC AGGTCGGCTT CACCACCTCG
CCGGAGAACT CCCGCAGCTC GCAGTACTGC ACCGATGTGG CGAAGATGAT CGGCGCGCCG
ATCTTCCACG TCAACGGCGA CGATCCCGAG GCCTGCGTGT GGGTGGCCAA GCTCGCCGTC
GATTTCCGCG AGCGCTTCCA CAAGGACGTC GTGATCGACC TCGTCTGCTA CCGCCGCCGC
GGCCACAACG AGGGCGACGA TCCGTCGATG ACCCAGCCCG GCATGTACGA CGTGATCGAC
ACCAAGCGCG GTGTCCGCAA GTCCTACACC GAGGCTCTGA TCGGCCGTGG CGACATCTCC
ACCAAGGAGG CCGAGGACGC ACTGCGCGAC TACCAGGGCC AGCTGGAGCG GGTGTTCAAC
GAGGTCAAGG AGCTCGAGAA GTTCCAGGCC GAGCCCGCAC CGTCGATCAT CGCCGACCAG
CCGCTGCCCA GCTCGCTGGT GACCGCCGTA CCGCTGGAGC AATTGCAGCG GATCGGCGAC
GCCTACGGGA ATGTGCCCGA GGGCTTCACC GTGCACCCGC GCGTGGCCCC CGTGGTCAAG
CGTCGGTTCG AGATGTCGCG CGAGGGCGGC GTCGACTGGG CGTTCGGTGA GCTCCTCGCG
TTCGGCACCC TGCTGGAGGA GGGCCGCACG GTCCGCCTGG CCGGCCAGGA CAGCCGCCGC
GGCACCTTCA CGCAGCGTCA CGCGGTGCTG ATCGATCGCC AGTCCGGGCA GGAGTACACC
CCGCTCGACA ACCTCGGCCC CGACGGCACC CCGTCGCCCG GCAAGTTCAT GGTCTACGAC
TCGGCGCTCA CCGAGTTCGC GGGCCTGGGC TTCGAGTACG GCTACTCGGT GGCCGACGAG
TCGGCGCTGG TGTGTTGGGA GGCGCAGTTC GGCGACTTCG TCAACGGCGC GCAGTCGATC
ATCGACGAAT TCATCAGCTC GGGAGAGGCC AAGTGGGGCC AGACCTCGGG CGTCACGCTG
CTGCTCCCCC ACGGCCACGA GGGCCAGGGG CCCGACCACA CCTCGGCCCG TATCGAGCGG
TTCCTGCAGT TGTGCGCCGA GGGCTCGATG ACGGTCGCGA TGCCGTCGAC CCCCGCGTCG
TACTTCCACC TGTTGCGCCG CCACGCGCTC GACGGTGTGC GCCGCCCGAT GGTGGTCGCG
ACGCCGAAGT CGATGCTGCG CAACAAGGCG GCGGTGAGCC CGCTGGAGGA CTTCACCTCG
GGCAAGTTCC GTTCGGTGAT CGACGATCCG GCCTTCGAGG TCGACGGCGG CAACCGCGAC
GGCGTGTCCC AGCTCCTGCT GGTCTCCGGC AAGCTGTACT ACGAGCTGGA GGCTCGCCGG
AAGAAGGACA ACCGCACCGA CGTGGCGATC ATCCGCATGG AGCAGCTCTA CCCGCTGCCC
TCGCGGCGCC TGCCGGCCAC GCTGGACAAG TACCCCAACG CGAAGGACGT GCGCTGGGTG
CAGGAGGAGC CGGCCAACCA AGGTGCGTGG CCGTTCTTCG GCCTGGAGCT GCCGCAGCTC
GACGAGCGCC TCGTGGGCAT CAAGCGCGTC TCGCGGCGCG CCATGTCGGC ACCGTGCTCG
GGTTCGTCGA AGGTGCACGC GGTGGAGCAG GCACAGATCA TCGACGAGGC CTTCGCCTGA
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| Protein sequence | MSSSSVSDFG QNEWLVEEMY ERFKADPNSV DPSWHDFLST YQPGAAAANG SAPAAAAAPA
APAAPAPAAA APAVTPPAKA AESTLTPAPS KPVTPAPSSP AKPAPAPKTP ATAEFPAEEE
HQVLRGAANA VVKNMNASRE IPTATSVRAM PVKVMFDNRV VINNHLARTR GGKISFTHIL
GYALVQGVKA FPNMNRHFAE IDGKPNAVTP PHVNLGIAID LVGKNGSRSL VVAGVKNAET
MDFAQFVAAY EDIVRRARNG KLTAEDFAGV TISLTNPGGI GTVHSVPRLM VGQGAIIGVG
AMEYPAEFQG ASEEKIADLG VGKLTTLTST YDHRIIQGAE SGDFLRYVHE LTLSDEFWDD
IFRTLHVPYE PVRWRRDIPP HGIDKDARVL ELIAAYRARG HLMADVDPLR FNNDKLESHP
DLNVLTYELT LWDLDRTFNV GGFHGEDRLK LRKVLSVLRD AYCRHVGIEY AHILEPEQQK
WLQERVEAKD SKPSVAEQKY ILSKLNAAEA FETFLQTKYV GQKRFSLEGA ESVIPMMDAV
LDQAAEHSLD EVVIGMPHRG RLNVLANIVG KPYSKIFTEF EGNLNPAQAH GSGDVKYHLG
AEGKYYQMFG ENEITVSLVA NPSHLEAVDP VLEGIVHAKQ DMLNPPEGTH PVMPLMLHGD
AAFAGQGVVA ETLNMANLDG FSNGGTVHIV VNNQVGFTTS PENSRSSQYC TDVAKMIGAP
IFHVNGDDPE ACVWVAKLAV DFRERFHKDV VIDLVCYRRR GHNEGDDPSM TQPGMYDVID
TKRGVRKSYT EALIGRGDIS TKEAEDALRD YQGQLERVFN EVKELEKFQA EPAPSIIADQ
PLPSSLVTAV PLEQLQRIGD AYGNVPEGFT VHPRVAPVVK RRFEMSREGG VDWAFGELLA
FGTLLEEGRT VRLAGQDSRR GTFTQRHAVL IDRQSGQEYT PLDNLGPDGT PSPGKFMVYD
SALTEFAGLG FEYGYSVADE SALVCWEAQF GDFVNGAQSI IDEFISSGEA KWGQTSGVTL
LLPHGHEGQG PDHTSARIER FLQLCAEGSM TVAMPSTPAS YFHLLRRHAL DGVRRPMVVA
TPKSMLRNKA AVSPLEDFTS GKFRSVIDDP AFEVDGGNRD GVSQLLLVSG KLYYELEARR
KKDNRTDVAI IRMEQLYPLP SRRLPATLDK YPNAKDVRWV QEEPANQGAW PFFGLELPQL
DERLVGIKRV SRRAMSAPCS GSSKVHAVEQ AQIIDEAFA
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