| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1163 |
|---|
| Symbol | |
|---|
| ID | 9155303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 1191162 |
|---|
| End bp | 1192973 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 603 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_003646133 |
|---|
| Protein GI | 296138890 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATTCCG CGCACAAGAA CACCACCGTC GGACTGACCG ATCTGGCCAA GGGCCTCCGA
CTCCTGGTGC CGGATCTGCC GCTCCTGGTC AAGGAGGGTC CATCGATCCT GCTGCGGTCA
CAGAACAGCA AGCAGACGAT CGGTTCGGTG TTCCAGAAGC GGGCGGCGCA GAACCCGTCG
CGCGACTTCC TGCGCTTCCG TGGCGAGGGC ATCAGCTACG GCGAGGCCAA CGCCACCGTC
AACACCTACG CGCGGGTCTT GCAGCAGCGC GGCGTCAAGG TGGGCGATGT GGTCGGCGTC
GTGATGCACA ACCACCCGCA GATGGTTCTG GTGATGCTGG CCATCGTGAA GGTGGGCGCC
ACCGCCGGCC TGGTGAACTA CAACCAGCGC GGCGCCGTTC TCGCCCACAG CCTGGGCATC
CTCGACACCG GCACCATCGT CACGGACGAG GAGGACCTCG AGGCTTTCGA TTCGCTCGAC
GACGCCGATA AACCCGCCGA CGGCGTGTTG CTCACGGTCG AAGACCTCGC CAAGCAGGCC
CGCGCGGTGC GCACCCAGGA TCCATCGGCG ATCGAGAACC CGGCGGTCAC CTCGACCCTG
CCCGCCAGCA CCCGCGCCTT CTACGTCTTC ACCTCCGGCA CCACCGGCCT GCCGAAGGCG
TCGATCATGA CCCACTACCG CTGGCTCAAG GGCATGTCGG GCTTCGGTGC CACCGCGGTT
CGTATGCGCG GCAACGACGT GATGTACTGC CCGCTTCCGC TGTATCACAA CAACGCAGCG
CTCGTCGCTC TCGGATCGGT GCTGGTTTCC GGTGCCACCC TCGCCATCGG GCGCAAGTTC
TCGGCGTCGA AGTTCTGGGA CGAGGCCAAT GAGAATTCGG CGACCATGTT CATCTACATC
GGCGAGATCT GCCGCTACCT GCTGAATCAG CCGGCCAAGC CCAGCGACCG TTCGAACACC
ATCCGCGTGG CCGCGGGAAA CGGTATGCGC CCGGAGATCT GGAGCGAGTT CCAGGAGCGC
TTCGGTATCG AGCGGATCAT GGAGTTCTAC GCGGCCAGCG AGACCAACAT CGCGTTCGTC
AACGTCTTCA ACATCGAGGG CACGGTGGGT CTGTGCCCGC TGCCGCACGC CGTGGTCGAG
TACGACATCG ACACCGCCGG CCCGCTGCGC GACGGTGCCG GCCGGCTCAC GCGGGTCAAG
AAGGGGCAGA ACGGCCTGCT GCTCACCAAG ATCACCAAGG CGGCCCCCTT CGACGGATAC
ACCGACGGTA AGGCCAACGA CGCCAAGCTG ATCCGCGACG GATTCAAGGA CGGCGACGTG
TGGTTCAACA CGGGCGACGT GGTGACCAAC CAGGGCTTCG ACCACATCGC CTTCGTGGAC
CGGCTCGGCG ACACCTTCCG CTGGAAGGGC GAGAACGTCG CCACGACCGA GGTCGAGGGC
GCGCTGGACG AGGCCGACCA GGTGGAGGGG GCGATCGTCT ACGGCGTCGC GATCCCCGGT
GCCGACGGTA AGGCCGGGAT GGCCGCGGTG AAGCTGGCGC AGGATTGGGA CTTCGACGGT
GCGGTGCTCG CCACCGAGCT GCGGGACCGC CTGCCCGGCT ATGCGATTCC GCTGTACGTG
CGACTCGTCC CGAGCCTGGA GGTGACCTCC ACCTTCAAGA GCCTCAAGGG AGATCTGCGC
AAGGAGGGCT TCGAGTCCAC CGGCGACGAT CCGCTGTACG TCTTCGTCGG CGGCGCCGAT
GGATACGTGC CCGCGTACGA GGGCTTCGCC GCCGATGTCG CGGCCGCCAA GGTCCCGGAT
CTGCGTAACT GA
|
|---|
| Protein sequence | MNSAHKNTTV GLTDLAKGLR LLVPDLPLLV KEGPSILLRS QNSKQTIGSV FQKRAAQNPS
RDFLRFRGEG ISYGEANATV NTYARVLQQR GVKVGDVVGV VMHNHPQMVL VMLAIVKVGA
TAGLVNYNQR GAVLAHSLGI LDTGTIVTDE EDLEAFDSLD DADKPADGVL LTVEDLAKQA
RAVRTQDPSA IENPAVTSTL PASTRAFYVF TSGTTGLPKA SIMTHYRWLK GMSGFGATAV
RMRGNDVMYC PLPLYHNNAA LVALGSVLVS GATLAIGRKF SASKFWDEAN ENSATMFIYI
GEICRYLLNQ PAKPSDRSNT IRVAAGNGMR PEIWSEFQER FGIERIMEFY AASETNIAFV
NVFNIEGTVG LCPLPHAVVE YDIDTAGPLR DGAGRLTRVK KGQNGLLLTK ITKAAPFDGY
TDGKANDAKL IRDGFKDGDV WFNTGDVVTN QGFDHIAFVD RLGDTFRWKG ENVATTEVEG
ALDEADQVEG AIVYGVAIPG ADGKAGMAAV KLAQDWDFDG AVLATELRDR LPGYAIPLYV
RLVPSLEVTS TFKSLKGDLR KEGFESTGDD PLYVFVGGAD GYVPAYEGFA ADVAAAKVPD
LRN
|
|---|
| |