Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1138 |
Symbol | |
ID | 9155278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 1166991 |
End bp | 1168091 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | TrkA-N domain protein |
Protein accession | YP_003646108 |
Protein GI | 296138865 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.576747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGCAC GCAGCTCATT CCGTCGCCGC AGCAAGTCCG AGCTGACGGA TCTCCCGGAC CACGCGCTGG TCAACGTCCT GCGCATCCCC GCGGGCGACA CCAACCCGTG GCGCGCCATC TGGGCGCGTG TCGTGGTCGC GCTCGGTGCG CTGTTCCTCG CGGTGTTCAT CGTCTACCTC GAACGGGACG GGTATCGCGA TACCGCGGTC GAAGCCGGAT ACCAGGGCAA GACCCAGCTC ACGTTCCTGG ACTGCCTGTA CTACGCGACG GTGTCGCTGT CGACCACCGG ATACGGCGAC ATCACGCCGA TCAGCCAGTC CGCGCGCCTG ATCAACGTCC TGCTGGTCAC GCCGCTGCGC ATCCTGTTCC TCATCGTCTT GGTCGGCACC ACGCTCCAAG TGCTTACGGA GCGTTCCCGC CAGGCGTTCA AAATCCAACG TTGGAGGTCT GCTGTGCACA ACCACACGAT CGTCGTGGGC TACGGCACCA AGGGCCGGAC CGCGGTAAGC GCGATGATCA ACGACGGCAT CGAGCCGAGC AAGATCGTCG TGGTCGACAC CGATCAGGCT GCCCTGGAGG TCGCCGAGAT CGACGGTCTC GTCACGGTCC GCGGTGACGC CACCAAAGCC GACGTGCTGC GGCTCGCGGG TGCGCCCCGC GCGGAGTCGA TCATCATCGG CGCCAATCGC GATGACGCCG CGGTGATGGT CACGCTCACT GCGCGCGAAC TGGCGCCCAA GGCGAAGATC GTCGCCTCGG TCCGCGAGTC CGAGAACACG CATCTGCTGC GCCAGTCCGG CGCCGACTCG GTGGTCGTCT CCTCGGAGAC GGCCGGCCGC CTGCTCGGCA TGGCGACCAC CACGCCGTCG GTCGTGGAGA TGATCGAGGA CCTTCTTTCG CCCGGCGACG GTTTCAACAT CGCCGAGCGC GAGGTGACTC GCGTCGAGGT GGGACGCTCG CCGCGACATC TGCCGAACAT CGTTCTGGGC GTGGTCCGCA AGGGGCATCT CTATCGCGTC GATTCGCCCG CGGTCTCGGT CGTCGAGGCC GGCGACCGGC TGCTGTTCGT GCGCAATGCC GATGTGAAGG CGTCGAGCTA G
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Protein sequence | MAARSSFRRR SKSELTDLPD HALVNVLRIP AGDTNPWRAI WARVVVALGA LFLAVFIVYL ERDGYRDTAV EAGYQGKTQL TFLDCLYYAT VSLSTTGYGD ITPISQSARL INVLLVTPLR ILFLIVLVGT TLQVLTERSR QAFKIQRWRS AVHNHTIVVG YGTKGRTAVS AMINDGIEPS KIVVVDTDQA ALEVAEIDGL VTVRGDATKA DVLRLAGAPR AESIIIGANR DDAAVMVTLT ARELAPKAKI VASVRESENT HLLRQSGADS VVVSSETAGR LLGMATTTPS VVEMIEDLLS PGDGFNIAER EVTRVEVGRS PRHLPNIVLG VVRKGHLYRV DSPAVSVVEA GDRLLFVRNA DVKASS
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