Gene Tpau_1104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1104 
Symbol 
ID9155244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1131328 
End bp1133433 
Gene Length2106 bp 
Protein Length701 aa 
Translation table11 
GC content69% 
IMG OID 
ProductMale sterility domain protein 
Protein accessionYP_003646075 
Protein GI296138832 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.972313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGCT ACTTCGTCAC GGGCGGGACC GGCTTCATCG GTCGCGCCGT TGTGGCGCGC 
CTCGCCGCCG CCGACCGCGA CGCGACGATC TACGTGCTGG TCCGCGATCA GTCACTGCCC
CGGTTCGAGC GCCTGATCGC CGATCTGGGC CACGAATCGG CGCCCCAGGT GGTACCGGTG
CCCGGCGACA TCACCGAGCC CGGTCTGGGC ATCTCCCCCG GCGATCTGCC CGCCGGTGTG
GACCACGTGA TCCACCTCGC CGCCCTGTAC GACATGGAGG CACCCGAGGA GGCCCAGCAG
ATCACCAACG TCGACGGCAC CCGGAACGTG ATCGACGTGA CCCGGGCGCT CGGCGCCACT
CTGCATCACG TCTCGTCGCT GGCCGTGGCC GGCAACTACG AGGGCCGGTA CGCGGAGACC
GACTTCGACG TGGGGCAGAG CTTCCCCAGC CCGTACCACC GCACCAAGTA CGAGGCCGAA
CAGCTGGTGC GCGAATCCGA TGTGCCGTGG CAGGTGTACC GCCCCTCGAT CGTGGTCGGT
GATTCGGTGA CCGGCGCCGG CGACAAGATC GACGGGCCCT ACTACTTCTT CCCGTTCCTG
CGCCTGATGG GCACCATCCC GCACCACTTG CGGGTGCCCT TCGCCAACCT CGGCTACACC
AACATCGTGC CGGTCGACTT CGTGGCCTCG GCCCTGGTCG CGTTGGTGAC CACCCCGGCA
CCGCCGGGCA CTGTGTACCA CCTGGCCGAC CCCAAGGGCC AGAGCATGAC CACGCTGTAC
GACGCGGTCG CACCGGCCTT CTCGGGCCCG AAGACGGTCT CGCTCCCCGG CGCACCGCTC
GGCGAGTTCG CGGCGCGCGT GGGCCGCCGC AACGAGGTCC GCGCCCTACG CGACACCGTG
GCCCGGCAGT TGGGCATTCC CCCGTCGGTC CTGGACTACC CGTTCTACAA CACGCGGTTC
GACTCGGCCG CCACGCACGC CATCCTGCGT CGGCTCGGAG TACGACTGCC GCGCCTGAAG
TCGTACGGCC CCAGGATCTT CCAGTACTGG GCGCAGAATC TCGACCCGGC ACGCAACCGG
CGCGACGATC CCCGCGGCCC CCTGGTGGGC AAGCACATCC TGCTCACCGG CGGCTCATCG
GGCATCGGCA AGGAAGCCGC GAAGCAGGCG GCGGCCAAGG GCGCCCACGT GTTCATCGTG
GCGCGCAAGC CGGAGGACCT GGCCGAAGCG GTGGCCGAAA TCGAGGCCGA GCCCGGGATT
CCCGGCGTCC CGAAGGGCAC GGTGCGCGCC TACCAGTGCG ATGTGACCGA CCCCGAGGCG
GTGCGCACCA CGGTGCAGCA GATCCTCGCC GAACACGGCC ACGTGGATGT GCTGGTCAAC
GGTGCCGGCC GATCGATCCG GCGATCCACG ATCAACTCCG TGGACCGCGC CCACGACTAT
CAGCGGACCA TGGCGGTCAA CTACTTCGGC GCCGTGTATC TGATCCTGGA ACTGTTGCCG
CACATGACCG CCCGCAAGTC CGGTCATGTA GTGAATCTGT CGTCGATCGG CGTGCAGGTT
CGCGGACCGC GGTTCGCGGC GTACATCGCG TCCAAATCAG CGCTGGAGGC GTTCAGCGAT
ATCACCGCCT CGGAGACGGT GTCGGATCAC GTGACCTTCA CCAACATTCA CATGCCGCTG
ACCCGCACCC GGATGATCGA GCCGACCGAA GGCTACGACA ACGCCATGGC CCTGTCGGTC
GAGAAGGCCG GCCAGATCGT GGTGCGGGCG ATCGTCGAAC GGCCGCGCCG GATCGACACC
CCGCTCGGCA CACTCGCCCA GTTCGGCCAG TTCCTGTCCC CGCGGATCTC CGCGGCCGCG
CAGCACCAGG GCTACCTGTT GTTCCCGGAG TCGGCCGCGG CCGAGGGACG CGAACGTGAC
GTCAATGCCA TCGAAGCGGT TGTGGCCGAG GTGGATACGC CGCGCGGGCG GCTCGCCGCC
ACCAAGGATC TATCGAAGGA CCTGTCCACC GCGGTGGCCA GCCCGCTGTT CGGCATCTCC
GGCGACCAGG GCCTGCGTCG GCTGGCCCGC AAGACCCTCA ACCGGCTGCC CGGTATCAAC
TGGTAA
 
Protein sequence
MASYFVTGGT GFIGRAVVAR LAAADRDATI YVLVRDQSLP RFERLIADLG HESAPQVVPV 
PGDITEPGLG ISPGDLPAGV DHVIHLAALY DMEAPEEAQQ ITNVDGTRNV IDVTRALGAT
LHHVSSLAVA GNYEGRYAET DFDVGQSFPS PYHRTKYEAE QLVRESDVPW QVYRPSIVVG
DSVTGAGDKI DGPYYFFPFL RLMGTIPHHL RVPFANLGYT NIVPVDFVAS ALVALVTTPA
PPGTVYHLAD PKGQSMTTLY DAVAPAFSGP KTVSLPGAPL GEFAARVGRR NEVRALRDTV
ARQLGIPPSV LDYPFYNTRF DSAATHAILR RLGVRLPRLK SYGPRIFQYW AQNLDPARNR
RDDPRGPLVG KHILLTGGSS GIGKEAAKQA AAKGAHVFIV ARKPEDLAEA VAEIEAEPGI
PGVPKGTVRA YQCDVTDPEA VRTTVQQILA EHGHVDVLVN GAGRSIRRST INSVDRAHDY
QRTMAVNYFG AVYLILELLP HMTARKSGHV VNLSSIGVQV RGPRFAAYIA SKSALEAFSD
ITASETVSDH VTFTNIHMPL TRTRMIEPTE GYDNAMALSV EKAGQIVVRA IVERPRRIDT
PLGTLAQFGQ FLSPRISAAA QHQGYLLFPE SAAAEGRERD VNAIEAVVAE VDTPRGRLAA
TKDLSKDLST AVASPLFGIS GDQGLRRLAR KTLNRLPGIN W