Gene Tpau_1100 details

Gene Information

• Locus tag: Tpau_1100
• ID: 9155240
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1126645
• End bp: 1127409
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 70%
• Product: protein of unknown function DUF159
• Protein accession: YP_003646071
• Protein GI: 296138828

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGCGGAC GATACGCGGT CACCACCGAC CCCGCGCTGC TCGCGGCGGA GATCGACGCG 
GTCGATGAAA CCGAGGGCAC CGAGCTCGAT GTGCCCGGCT ACAACGTGGC CCCCACGACC 
ACGGTGGTCG CGGTGGTCGC CCGGCATTCG CGGGAGCAGC CCGACGATGC CGCCACGCGG 
CGGCTGCGTG CCATGCGATG GGGGTTGCTG CCGTCCTGGC AGAAGACCCT CAGTGGGCCG 
CCGCTGTTCA ACGCGCGAGC GGAGTCGGTG GCCGAGAAGC CGGCCTTCCG CGCCGCGCTG 
AAGACCAAGC GGTGCCTGAT CCCGATGGAC GGCTGGTACG AATGGCAGGT GCTCGACGAC 
CCCGAGCAGG TCAGGAAGCC ACGTAAGCAG CCGATGTACC TCACGCCGGT GGACGGCACC 
CGCATGTACA TCGCCGGCCG GTGGTCGGTG TGGCGTCCGG CCGGAGCGGG ACTGGACGTT 
CCGCCGACCC TATCGGCCAC GGTGCTCACC ACCGATGCGG TGGGCCCGCT GCGCGCGGTG 
CACGACCGGA TGCCGCTCGT GCTCACGCCC GAGCGGTTCG ACGAGTGGCT CAGCCCCGAC 
GGCCCCGCCG ACCCGGATCT GTTGCTGCCG CCGGGGCTCG ACGTGGCCGA GAGGATCGAG 
ATCCGGCCCG TCTCCGCGCT GGTCAACACT GTCAAGAACG ATGGCCCTGA GTTGATCCGG 
CGTGCCGAAC CGGGCAGTGA ACCGGGACAG TTGAGCTTGC TGTAG 

 

Protein sequence

MCGRYAVTTD PALLAAEIDA VDETEGTELD VPGYNVAPTT TVVAVVARHS REQPDDAATR 
RLRAMRWGLL PSWQKTLSGP PLFNARAESV AEKPAFRAAL KTKRCLIPMD GWYEWQVLDD 
PEQVRKPRKQ PMYLTPVDGT RMYIAGRWSV WRPAGAGLDV PPTLSATVLT TDAVGPLRAV 
HDRMPLVLTP ERFDEWLSPD GPADPDLLLP PGLDVAERIE IRPVSALVNT VKNDGPELIR 
RAEPGSEPGQ LSLL